ID A0A1U8KVY0_GOSHI Unreviewed; 447 AA.
AC A0A1U8KVY0;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Zinc finger CCCH domain-containing protein ZFN-like {ECO:0000313|RefSeq:XP_016705200.1, ECO:0000313|RefSeq:XP_016705202.1};
GN Name=LOC107920166 {ECO:0000313|RefSeq:XP_016705200.1,
GN ECO:0000313|RefSeq:XP_016705202.1, ECO:0000313|RefSeq:XP_016705203.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016705203.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016705200.1, ECO:0000313|RefSeq:XP_016705202.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016705200.1,
RC ECO:0000313|RefSeq:XP_016705202.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016705200.1; XM_016849711.1.
DR RefSeq; XP_016705202.1; XM_016849713.1.
DR RefSeq; XP_016705203.1; XM_016849714.1.
DR STRING; 3635.A0A1U8KVY0; -.
DR PaxDb; 3635-A0A1U8KVY0; -.
DR GeneID; 107920166; -.
DR KEGG; ghi:107920166; -.
DR OrthoDB; 33612at2759; -.
DR Proteomes; UP000189702; Chromosome 24.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 2.30.30.1190; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR12506; PROTEIN PHOSPHATASE RELATED; 1.
DR PANTHER; PTHR12506:SF18; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED; 1.
DR Pfam; PF00642; zf-CCCH; 5.
DR SMART; SM00356; ZnF_C3H1; 5.
DR SUPFAM; SSF90229; CCCH zinc finger; 4.
DR PROSITE; PS50103; ZF_C3H1; 5.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 55..83
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 100..128
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 146..174
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 307..335
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 353..381
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 55..83
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 100..128
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 146..174
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 307..335
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 353..381
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 423..447
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 447 AA; 48855 MW; B64B62BD72D31DC3 CRC64;
MEFSFDAGIP MSRTATAAVP VTEGSSLSPS LNQDAMWQMN LRSSETMESS PYPERPGEPD
CSYYIRTGLC RFGATCHFNH PPNRKLAIAA ARMKGEFPER VGQPECQYYL KTGTCKFGAT
CKFHHPRDKA GIAGRVSLNI LGYPLRPNET ECAYYLRTGQ CKFGSTCKFH HPQPTNMMVS
LRGSPIYQTV PSPTTPGQQS YPGGITNWSR ASFIPNPHWQ GPSSYASLIL PQGMVSVPGW
NAYSGQLASV SSSENLQQTN VNHQIHGTPR QNESATAGSQ ASFSELRSSS VPVGVYALQR
ENVFPERPGE PECQFYMKTG DCKFGAVCKF HHPRERVLPA PDCVLSPIGL PLRPGEPLSI
FYSRYGICKF GPSCKFNHPM GIFTYNYSPS SPSDAPVHCF LGSSSGTAGL NLSSEGLVEA
VPTKPRRLSL SKNRQLSPSD DDIDAEG
//
