ID A0A1U8L8F4_GOSHI Unreviewed; 555 AA.
AC A0A1U8L8F4;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Transcription factor GAMYB-like {ECO:0000313|RefSeq:XP_016710877.1};
GN Name=LOC107924795 {ECO:0000313|RefSeq:XP_016710877.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016710877.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016710877.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016710877.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_016710877.1; XM_016855388.1.
DR AlphaFoldDB; A0A1U8L8F4; -.
DR PaxDb; 3635-A0A1U8L8F4; -.
DR GeneID; 107924795; -.
DR KEGG; ghi:107924795; -.
DR OrthoDB; 906784at2759; -.
DR Proteomes; UP000189702; Chromosome 26.
DR CDD; cd00167; SANT; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR47995:SF29; TRANSCRIPTION FACTOR GAMYB ISOFORM X1; 1.
DR PANTHER; PTHR47995; TRANSCRIPTION FACTOR MYB33-RELATED; 1.
DR Pfam; PF00249; Myb_DNA-binding; 2.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51294; HTH_MYB; 2.
DR PROSITE; PS50090; MYB_LIKE; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 35..87
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 38..87
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 88..142
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 88..138
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 555 AA; 60484 MW; EE76A9C251856D6C CRC64;
MSHTKNERED GILSKDQTES SLIDDGNCGA GTGGGVVLKK GPWTSAEDAI LIDYVKKHGE
GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA
HLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVCLQALQD SHGTSAVNGG DKGPHDILQN
NSYEIPDVIF DSLKTSQNVL PYVPELPDIS TGSMLMKGLG SQYCSFMPPT IHRQKRLREA
TAFFPGYTGA VKNECPLFEQ FQDDISDKAA QSFGLSFPIE PDPATKNSLQ FGVFPGSHNL
SNGNFSASEP PLEAVKLELP SLQYPETELG NWGTFSCPPP LLESVDAFIQ SPPPTSIAES
DSLSPRNSGL LDALLHEAKT LSSAKNHASE KSSYSATPGD IAESSTFNIC ETEWENCGEP
LSPMGHSATS LLSECISASG STLDEQPPAE TFTESHVKSE PADYVFTPEI QNEAPIRLDS
CHPDTLLASN WLEQDSGYDK DQTIMTDSIA ALLGDDLSSE YKNMAAGTSI SSQAWGLGSC
AWNNMPAVCQ MSELP
//