GenomeNet

Database: UniProt
Entry: A0A1U8L8F4_GOSHI
LinkDB: A0A1U8L8F4_GOSHI
Original site: A0A1U8L8F4_GOSHI 
ID   A0A1U8L8F4_GOSHI        Unreviewed;       555 AA.
AC   A0A1U8L8F4;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   SubName: Full=Transcription factor GAMYB-like {ECO:0000313|RefSeq:XP_016710877.1};
GN   Name=LOC107924795 {ECO:0000313|RefSeq:XP_016710877.1};
OS   Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016710877.1};
RN   [1] {ECO:0000313|Proteomes:UP000189702}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX   PubMed=25893780; DOI=10.1038/nbt.3208;
RA   Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA   Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA   Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA   Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA   Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT   "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT   provides insights into genome evolution.";
RL   Nat. Biotechnol. 33:524-530(2015).
RN   [2] {ECO:0000313|RefSeq:XP_016710877.1}
RP   IDENTIFICATION.
RC   TISSUE=Leaf {ECO:0000313|RefSeq:XP_016710877.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   RefSeq; XP_016710877.1; XM_016855388.1.
DR   AlphaFoldDB; A0A1U8L8F4; -.
DR   PaxDb; 3635-A0A1U8L8F4; -.
DR   GeneID; 107924795; -.
DR   KEGG; ghi:107924795; -.
DR   OrthoDB; 906784at2759; -.
DR   Proteomes; UP000189702; Chromosome 26.
DR   CDD; cd00167; SANT; 2.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017930; Myb_dom.
DR   InterPro; IPR001005; SANT/Myb.
DR   PANTHER; PTHR47995:SF29; TRANSCRIPTION FACTOR GAMYB ISOFORM X1; 1.
DR   PANTHER; PTHR47995; TRANSCRIPTION FACTOR MYB33-RELATED; 1.
DR   Pfam; PF00249; Myb_DNA-binding; 2.
DR   SMART; SM00717; SANT; 2.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS51294; HTH_MYB; 2.
DR   PROSITE; PS50090; MYB_LIKE; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT   DOMAIN          35..87
FT                   /note="HTH myb-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51294"
FT   DOMAIN          38..87
FT                   /note="Myb-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50090"
FT   DOMAIN          88..142
FT                   /note="HTH myb-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51294"
FT   DOMAIN          88..138
FT                   /note="Myb-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50090"
FT   REGION          1..27
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..15
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   555 AA;  60484 MW;  EE76A9C251856D6C CRC64;
     MSHTKNERED GILSKDQTES SLIDDGNCGA GTGGGVVLKK GPWTSAEDAI LIDYVKKHGE
     GNWNAVQKHS GLFRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA
     HLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEVCLQALQD SHGTSAVNGG DKGPHDILQN
     NSYEIPDVIF DSLKTSQNVL PYVPELPDIS TGSMLMKGLG SQYCSFMPPT IHRQKRLREA
     TAFFPGYTGA VKNECPLFEQ FQDDISDKAA QSFGLSFPIE PDPATKNSLQ FGVFPGSHNL
     SNGNFSASEP PLEAVKLELP SLQYPETELG NWGTFSCPPP LLESVDAFIQ SPPPTSIAES
     DSLSPRNSGL LDALLHEAKT LSSAKNHASE KSSYSATPGD IAESSTFNIC ETEWENCGEP
     LSPMGHSATS LLSECISASG STLDEQPPAE TFTESHVKSE PADYVFTPEI QNEAPIRLDS
     CHPDTLLASN WLEQDSGYDK DQTIMTDSIA ALLGDDLSSE YKNMAAGTSI SSQAWGLGSC
     AWNNMPAVCQ MSELP
//
DBGET integrated database retrieval system