ID A0A1U8L8T5_GOSHI Unreviewed; 390 AA.
AC A0A1U8L8T5;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Uncharacterized protein LOC107924653 {ECO:0000313|RefSeq:XP_016711015.1};
GN Name=LOC107924653 {ECO:0000313|RefSeq:XP_016711015.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016711015.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016711015.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016711015.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016711015.1; XM_016855526.1.
DR AlphaFoldDB; A0A1U8L8T5; -.
DR PaxDb; 3635-A0A1U8L8T5; -.
DR GeneID; 107924653; -.
DR KEGG; ghi:107924653; -.
DR OrthoDB; 950946at2759; -.
DR Proteomes; UP000189702; Chromosome 1.
DR CDD; cd00303; retropepsin_like; 1.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR InterPro; IPR032567; LDOC1-rel.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR PANTHER; PTHR15503; LDOC1 RELATED; 1.
DR PANTHER; PTHR15503:SF43; REVERSE TRANSCRIPTASE RNASE H-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF08284; RVP_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 17..108
FT /note="Retrotransposon gag"
FT /evidence="ECO:0000259|Pfam:PF03732"
SQ SEQUENCE 390 AA; 44506 MW; 61DF6A80A0BFD522 CRC64;
MIDINYKPNQ KLKGDVSLLR DEAYQWWLMV EQYAQPEQVN WDYFKNVFQS KYMGPSYIKT
HGHEFINLVQ GDRSVAEYEA KFLKLSRYAR VLVVFDYDKC VRFKEGLRYD LWVLIAPQKE
QAFAALVDKA KIVEEIKPPK IDVSAEVTEI QLCRDYGKHH PGECWRKFGA CLRCGSMEYR
ARYYPCRPNQ PLRVVQQQPK GCGIVKGGNG YGRGQRAPSR GAGQTEAQQF VLVYAARCLK
DSDDDDVIAG VFFIYFVLYF ALIDIGSTHS YIASTVSANL GISVKNTAKE FSAVSLLVDL
MKFLLDEFDL ILGMDWLVKY RVSLDCASKR VTLKTDENSE VVMVGECRDY LSNVISAPVV
DKLIWKGCEL YLAFTSDYVL VKLSVGDFVL
//
