ID A0A1U8L8X9_GOSHI Unreviewed; 437 AA.
AC A0A1U8L8X9;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Zinc finger protein VAR3, chloroplastic-like {ECO:0000313|RefSeq:XP_016709608.1, ECO:0000313|RefSeq:XP_016709609.1};
GN Name=LOC107923924 {ECO:0000313|RefSeq:XP_016709608.1,
GN ECO:0000313|RefSeq:XP_016709609.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016709609.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016709608.1, ECO:0000313|RefSeq:XP_016709609.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016709608.1,
RC ECO:0000313|RefSeq:XP_016709609.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016709608.1; XM_016854119.1.
DR RefSeq; XP_016709609.1; XM_016854120.1.
DR STRING; 3635.A0A1U8L8X9; -.
DR PaxDb; 3635-A0A1U8L8X9; -.
DR GeneID; 107923924; -.
DR KEGG; ghi:107923924; -.
DR OrthoDB; 925736at2759; -.
DR Proteomes; UP000189702; Chromosome 26.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 4.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR23111:SF40; RNA-BINDING PROTEIN INVOLVED IN HETEROCHROMATIN ASSEMBLY-RELATED; 1.
DR PANTHER; PTHR23111; ZINC FINGER PROTEIN; 1.
DR Pfam; PF00641; zf-RanBP; 4.
DR SMART; SM00547; ZnF_RBZ; 4.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 4.
DR PROSITE; PS01358; ZF_RANBP2_1; 2.
DR PROSITE; PS50199; ZF_RANBP2_2; 4.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00322};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 280..309
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 319..348
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 358..387
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 391..420
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT REGION 252..272
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..272
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 437 AA; 49512 MW; DBEC180EAE660549 CRC64;
MATLQNFLSS SLTYNLPKKM SSSAFLHLST SIIRARNPLF LPFSSPPALS LRFHRYTSST
AALDTLNANT VSAEPQSHPW PEWVTFIDRL KSKGYFVEAN NTVTSDAGND YKDMNFVKDA
CISFARDRFD LFKLLSTDDI ETVVGSGCPN VLRKSVNSAK RLRAYVHLDE GDVCGACNLR
GSCDRAYVIL KESEAAARTV DIVRILLSYA LDPLVISERE KPPGREHIDA SARNLLSDLT
KLSETSCDAE IPKPAAKARP RKEKQISGND DAEFKNVEMK RGDWMCPKCN FLNFSRNLQC
LKCKEGGPKN VRGEEIEMKK GDWLCSECSF MNFSRNTRCL KCKAEGPKMV ATDDVQMKKG
DWNCPGCGFM NFASNRKCLR CKEARPKRQL NPGEWECPSC DFLNYRRNQV CLKCKHERPE
EATNEYDEHT WKRPQRS
//
