ID A0A1U8LEZ7_GOSHI Unreviewed; 246 AA.
AC A0A1U8LEZ7;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=RNA-binding protein 42-like {ECO:0000313|RefSeq:XP_016713150.1};
GN Name=LOC107926742 {ECO:0000313|RefSeq:XP_016713150.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016713150.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016713150.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016713150.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016713150.1; XM_016857661.1.
DR AlphaFoldDB; A0A1U8LEZ7; -.
DR STRING; 3635.A0A1U8LEZ7; -.
DR PaxDb; 3635-A0A1U8LEZ7; -.
DR GeneID; 107926742; -.
DR KEGG; ghi:107926742; -.
DR OMA; ANSDIEH; -.
DR OrthoDB; 5489197at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR CDD; cd12383; RRM_RBM42; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR034215; RBM42_RRM.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR47640:SF11; RNA-BINDING PROTEIN 42; 1.
DR PANTHER; PTHR47640; TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 138..216
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 246 AA; 27300 MW; 9AFD2FEAB7D7F55B CRC64;
MSIPPSSATP PASSSSSQFT YQTTANQSYF PLPFHLQQQP QHYASAPPSV SVAPAPVYPA
SVAPVPGVYS LPQYQQAQQL FQRDAQIVTP EALESVKAAL ASSEIEHKAE TKKKAIPRKA
AGQSWEDPTL AEWPENDFRL FCGDLGNEVN DDVLSKAFAR FPSFNMAKVV RDKRTGKTKG
YGFVSFANPS DLAAALKEMN GKYVGNRPIK LRKSNWKERI DQDALVRQKN HYQKKPKLQK
KGILHK
//
