ID A0A1U8LQK7_GOSHI Unreviewed; 581 AA.
AC A0A1U8LQK7;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Homeobox protein ATH1-like {ECO:0000313|RefSeq:XP_016716869.1, ECO:0000313|RefSeq:XP_016716870.1};
GN Name=LOC107929856 {ECO:0000313|RefSeq:XP_016716869.1,
GN ECO:0000313|RefSeq:XP_016716870.1, ECO:0000313|RefSeq:XP_016716871.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016716871.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016716869.1, ECO:0000313|RefSeq:XP_016716870.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016716869.1,
RC ECO:0000313|RefSeq:XP_016716870.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/BELL homeobox family.
CC {ECO:0000256|ARBA:ARBA00006454}.
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DR RefSeq; XP_016716869.1; XM_016861380.1.
DR RefSeq; XP_016716870.1; XM_016861381.1.
DR RefSeq; XP_016716871.1; XM_016861382.1.
DR STRING; 3635.A0A1U8LQK7; -.
DR PaxDb; 3635-A0A1U8LQK7; -.
DR GeneID; 107929856; -.
DR KEGG; ghi:107929856; -.
DR OrthoDB; 3180467at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR InterPro; IPR006563; POX_dom.
DR PANTHER; PTHR11850:SF231; HOMEOBOX PROTEIN ATH1; 1.
DR PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR Pfam; PF07526; POX; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00574; POX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000313|RefSeq:XP_016716869.1};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 479..542
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 481..543
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 552..581
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 563..581
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 581 AA; 64522 MW; 312F4DC7140E7237 CRC64;
MENDMFSIPR PMVSQNSVVI NGIPPETITN NSVVESNLFN QINQNQTLVG FPVLPLVQGE
FGGDLCSDLH VSNHARFFDS NALIASVGRK VASDASLDSS GLEHNIEFHE QFIGRTPVSS
TPPASCGLQE NLNELAIVAP SINPQDFRNY SSTECSDGIN STTVTSVNSV LNEVFGSMTN
KWDFEKFPGP LEHVGKTTLK TAFQPYSSIG CPDPNSWMAP NGANMSLNYP CGSSKNSNEL
SLSLATSLPG VICGNNIPDQ SSEINCCLNT TRLGSEQTSS NAKELSLSFG SDGPVQVLHL
ISGSRYLHAV QEILAQIANY SLDSLEQMSV GPGATMPFSS SCLAGRWMAV MDSNDCPNVD
GDTEVQLEAE LQKRTVEAKK TQLLTLLQVV DDRYSQCLDE IHTVISAFHA ATELDPRVHA
SFALHTISFL YKNLRERISN QILAMGANFN SECSRDREKS FQNSFIQEQW ALQQLKKKDQ
IWRPQRGLPE KSVSVLRAWM FQNFLHPYPK DAEKHLLAIK SGLTRSQVSN WFINARVRLW
KPMIEEMYSE MNKRKARQNE EGTKSNPRSQ ISINHQRFNF N
//
