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Database: UniProt
Entry: A0A1U8LXQ3_GOSHI
LinkDB: A0A1U8LXQ3_GOSHI
Original site: A0A1U8LXQ3_GOSHI 
ID   A0A1U8LXQ3_GOSHI        Unreviewed;       423 AA.
AC   A0A1U8LXQ3;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   SubName: Full=26S protease regulatory subunit 6A homolog {ECO:0000313|RefSeq:XP_016718188.1, ECO:0000313|RefSeq:XP_016753567.1};
GN   Name=LOC107930935 {ECO:0000313|RefSeq:XP_016718188.1};
GN   Synonyms=LOC107961902 {ECO:0000313|RefSeq:XP_016753567.1};
OS   Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016718188.1};
RN   [1] {ECO:0000313|Proteomes:UP000189702}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX   PubMed=25893780; DOI=10.1038/nbt.3208;
RA   Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA   Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA   Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA   Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA   Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT   "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT   provides insights into genome evolution.";
RL   Nat. Biotechnol. 33:524-530(2015).
RN   [2] {ECO:0000313|RefSeq:XP_016718188.1, ECO:0000313|RefSeq:XP_016753567.1}
RP   IDENTIFICATION.
RC   TISSUE=Leaf {ECO:0000313|RefSeq:XP_016718188.1,
RC   ECO:0000313|RefSeq:XP_016753567.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the AAA ATPase family.
CC       {ECO:0000256|ARBA:ARBA00006914, ECO:0000256|RuleBase:RU003651}.
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DR   RefSeq; XP_016718188.1; XM_016862699.1.
DR   RefSeq; XP_016753567.1; XM_016898078.1.
DR   STRING; 3635.A0A1U8LXQ3; -.
DR   PaxDb; 3635-A0A1U8LXQ3; -.
DR   GeneID; 107930935; -.
DR   GeneID; 107961902; -.
DR   KEGG; ghi:107930935; -.
DR   KEGG; ghi:107961902; -.
DR   OMA; NKISHEH; -.
DR   OrthoDB; 1707207at2759; -.
DR   Proteomes; UP000189702; Unplaced.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0008540; C:proteasome regulatory particle, base subcomplex; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR   GO; GO:0036402; F:proteasome-activating activity; IBA:GO_Central.
DR   GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR041569; AAA_lid_3.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR003960; ATPase_AAA_CS.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR032501; Prot_ATP_ID_OB_2nd.
DR   PANTHER; PTHR23073; 26S PROTEASOME REGULATORY SUBUNIT; 1.
DR   PANTHER; PTHR23073:SF7; 26S PROTEASOME REGULATORY SUBUNIT 6A; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF17862; AAA_lid_3; 1.
DR   Pfam; PF16450; Prot_ATP_ID_OB_C; 1.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00674; AAA; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|RuleBase:RU003651};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Hydrolase {ECO:0000313|RefSeq:XP_016718188.1,
KW   ECO:0000313|RefSeq:XP_016753567.1};
KW   Nucleotide-binding {ECO:0000256|RuleBase:RU003651};
KW   Protease {ECO:0000313|RefSeq:XP_016718188.1,
KW   ECO:0000313|RefSeq:XP_016753567.1};
KW   Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW   Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT   DOMAIN          203..342
FT                   /note="AAA+ ATPase"
FT                   /evidence="ECO:0000259|SMART:SM00382"
FT   COILED          28..69
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   423 AA;  47491 MW;  6A2EB15327ABF46A CRC64;
     MATAMVEDSS FEEDQLASMT TEDIVRASRL LDNEIRILKE EMQRTNLELD SYKEKVKENQ
     EKIKLNKQLP YLVGNIVEIL EMNPEDEAEE DGANIDLDSQ RKGKCVVLKT STRQTIFLPV
     VGLVDPDKLK PGDLVGVNKD SYLILDTLPS EYDSRVKAME VDEKPTEDYN DIGGLEKQIQ
     ELVEAIVLPM THKERFQKLG VRPPKGVLLY GPPGTGKTLM ARACAAQTNA TFLKLAGPQL
     VQMFIGDGAK LVRDAFQLAK EKSPCIIFID EIDAIGTKRF DSEVSGDREV QRTMLELLNQ
     LDGFSSDERI KVIAATNRAD ILDPALMRSG RLDRKIEFPH PTEEARARIL QIHSRKMNVH
     PDVNFEELAR STDDFNGAQL KAVCVEAGML ALRRDATEVN HEDFNEGIIQ VQAKKKASLN
     YYA
//
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