ID A0A1U8M184_GOSHI Unreviewed; 671 AA.
AC A0A1U8M184;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Zinc finger CCCH domain-containing protein 66-like {ECO:0000313|RefSeq:XP_016719304.1};
GN Name=LOC107931859 {ECO:0000313|RefSeq:XP_016719304.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016719304.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016719304.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016719304.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016719304.1; XM_016863815.1.
DR AlphaFoldDB; A0A1U8M184; -.
DR PaxDb; 3635-A0A1U8M184; -.
DR GeneID; 107931859; -.
DR KEGG; ghi:107931859; -.
DR OrthoDB; 600058at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1370.210; -; 1.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR045234; Unkempt-like.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR14493; UNKEMPT FAMILY MEMBER; 1.
DR PANTHER; PTHR14493:SF87; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66; 1.
DR Pfam; PF12796; Ank_2; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00248; ANK; 2.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 1.
DR PROSITE; PS50088; ANK_REPEAT; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT REPEAT 99..134
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 267..289
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 267..289
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 522..565
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 602..651
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 522..556
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 602..637
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 671 AA; 73360 MW; 40F110CC0CA21AFD CRC64;
MCSVAMGKST QTGGATQKFS DLLELSASND LISFRIAIEE EGHDIDEPSL WYGRRIGTKK
MGFEERTPLL IASIFGCKDV VNYIIKSGQV DVNRACGSDG ARALHCAAAG GSSGSPEIVK
ILLNACVDIN SVDANGNRPG DLIAPASCNS DCSSRKKLLE ALLKSNVDGG EGFPFRVGNE
MDVSEVQVDS IHRVWKDGNE KKEYPYDLTL PDIKNGMYGT DEFRMYTFKI QPCSRAYSHD
WTECPFVHPG ENARRRDPRK YVYSCVPCPE YRKGSCKQGD NCEYAHGIFE SWLHPAQYRT
RLCKDETNCN RRVCFFAHKP EELRPLYAST GSALPSPRSY SGSGLEFGSM SPLAPASPSV
IKPSTSTPPL TPTGTSSIGG SMWPNQSSIV PPTLQLPFSR LKAARTARGK DLNMDKLSLE
THRRFQQQQQ QLEQSPTSWN NPLSGELNRF GGVKSTSLDD IFGSLDSTKP QLQGLSLKAA
SPQLQSPTAV PKWQNRNQQL RASYPTNLAS SPIMMSPTFG VETSGPTAAS SLSSKRSPSV
IERPAGNRNS GFSTPASPVG AMPPNLSDWG SVDGKLDWGI QGEELKKLRK SASLVFLNNS
SNLPNTARSL PSTSEEPEAS RVQPHMNGST HSAGQVRPED QKQQKCHNTG NSDMLSAWME
QLYKDQDQIL N
//