ID A0A1U8M3X7_GOSHI Unreviewed; 1024 AA.
AC A0A1U8M3X7;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Protein transport protein Sec24-like At3g07100 {ECO:0000313|RefSeq:XP_016720338.1};
GN Name=LOC107932758 {ECO:0000313|RefSeq:XP_016720338.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016720338.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016720338.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016720338.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000256|ARBA:ARBA00008334}.
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DR RefSeq; XP_016720338.1; XM_016864849.1.
DR AlphaFoldDB; A0A1U8M3X7; -.
DR STRING; 3635.A0A1U8M3X7; -.
DR PaxDb; 3635-A0A1U8M3X7; -.
DR OrthoDB; 977017at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0030127; C:COPII vesicle coat; IBA:GO_Central.
DR GO; GO:0070971; C:endoplasmic reticulum exit site; IBA:GO_Central.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IBA:GO_Central.
DR GO; GO:0090110; P:COPII-coated vesicle cargo loading; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR CDD; cd01479; Sec24-like; 1.
DR Gene3D; 2.60.40.1670; beta-sandwich domain of Sec23/24; 1.
DR Gene3D; 1.20.120.730; Sec23/Sec24 helical domain; 1.
DR Gene3D; 3.40.20.10; Severin; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR Gene3D; 2.30.30.380; Zn-finger domain of Sec23/24; 1.
DR InterPro; IPR029006; ADF-H/Gelsolin-like_dom_sf.
DR InterPro; IPR017993; Atrophin-1.
DR InterPro; IPR007123; Gelsolin-like_dom.
DR InterPro; IPR036180; Gelsolin-like_dom_sf.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR012990; Sec23_24_beta_S.
DR InterPro; IPR041742; Sec24-like_trunk_dom.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR PANTHER; PTHR13803; SEC24-RELATED PROTEIN; 1.
DR PANTHER; PTHR13803:SF39; SECRETORY 24AB, ISOFORM A; 1.
DR Pfam; PF00626; Gelsolin; 1.
DR Pfam; PF08033; Sec23_BS; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR PRINTS; PR01222; ATROPHIN.
DR SUPFAM; SSF81995; beta-sandwich domain of Sec23/24; 1.
DR SUPFAM; SSF82754; C-terminal, gelsolin-like domain of Sec23/24; 1.
DR SUPFAM; SSF81811; Helical domain of Sec23/24; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR SUPFAM; SSF82919; Zn-finger domain of Sec23/24; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 353..391
FT /note="Zinc finger Sec23/Sec24-type"
FT /evidence="ECO:0000259|Pfam:PF04810"
FT DOMAIN 428..664
FT /note="Sec23/Sec24 trunk"
FT /evidence="ECO:0000259|Pfam:PF04811"
FT DOMAIN 670..754
FT /note="Sec23/Sec24 beta-sandwich"
FT /evidence="ECO:0000259|Pfam:PF08033"
FT DOMAIN 765..868
FT /note="Sec23/Sec24 helical"
FT /evidence="ECO:0000259|Pfam:PF04815"
FT DOMAIN 897..963
FT /note="Gelsolin-like"
FT /evidence="ECO:0000259|Pfam:PF00626"
FT REGION 1..254
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..28
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..70
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 86..122
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 136..178
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 201..215
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 232..254
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1024 AA; 113134 MW; A2A320783B8D1E2C CRC64;
MRPSATPFAS APPTVRPFSS SGPVVGSESS NVRPAPPGAP PTMTPFSSGG PRPPARFSDP
PVPSPPLTSV PPSGGSYQRF VTPPFPLAAQ APPARAPLVG QPPFQPPGSQ VSVPPPSFRP
QTQVLPVPMG SPPQNVNFPP SSANVPQPPS DSSFSGPRPN FQMASPLPDH SATKSSFQPP
FPGYPGKQPA VSQAPSPFPA QQGSFMPPPA PPSPFASQQG SYAPPSPVAP NLGYQSRDQM
QHPGSAPPTG SIQSLTEDFS SLSISSMPGS IEPGLDYRTL PRPLDGDLEP SSFLEMYPMN
CDPRYLRLTT SAIPNSQSLV SRWHLPLGAV VCPLAEAPEG EEVPVINFAS TGIIRCRRCR
TYVNPYVSFT DAGRKWRCNI CSLLNDVPGE YFANLDATGR RIDLDQRPEL LKGSVEFVAP
TEYMVRPPMP PLYFFLIDVS ISAVRSGMIE VVAQTISSCL DELPGFPRTQ IGFITFDSTI
HFYNMKSSLT QPQMMVVSDL DDVFVPLPDD LLVNLSESRN VVETFLDSLP SMFQDNVNVE
SAFGPALKAA FMVMSQLGGK LLIFQNTLPS LGYGRLKLRG DDLRVYGTDK EHTLRLPEDP
FYKQMAADLT KYQIGVNIYA FSDKYTDIAS LGTLAKYTGG QVYYYPSFQS NIHGEKLRRE
LARDLTRETA WEAVMRIRCG KGIRFTSYHG NFMLRSTDLL ALPAVDCDKA YAMQLSLEET
LLSTPTVYFQ VALLYTASCG ERRIRVHTAA APVVTDLGEM YRQADTGAIV SLFCRLAIEK
TLTSKLEEAR NSLQQRIVKA LREYRNLYAV QHRLGARMIY PESLKFLCLY GLALSKSVPL
KGGYADTQLD ERCAVGFTMM ALPVKKLLKL LYPSLIRIDE YLLKPSAQAD DFKNIMKRLP
LLAESLDSRG LYLYDDGLRF VIWFGRMLSP DIARNLLGPE FAAELSRVTL TEHDNEMSRR
LMKMLKRLRE SDPSYYQLPY LVRQGEQPRE GFLLLVNLLE DQMGGTVGYV DWIMQIHRQV
QQNA
//
