ID A0A1U8MB33_GOSHI Unreviewed; 916 AA.
AC A0A1U8MB33;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=B3 domain-containing transcription repressor VAL2-like isoform X1 {ECO:0000313|RefSeq:XP_016724051.1, ECO:0000313|RefSeq:XP_016724052.1};
GN Name=LOC107935936 {ECO:0000313|RefSeq:XP_016724051.1,
GN ECO:0000313|RefSeq:XP_016724052.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016724051.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016724051.1, ECO:0000313|RefSeq:XP_016724052.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016724051.1,
RC ECO:0000313|RefSeq:XP_016724052.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016724051.1; XM_016868562.1.
DR RefSeq; XP_016724052.1; XM_016868563.1.
DR STRING; 3635.A0A1U8MB33; -.
DR PaxDb; 3635-A0A1U8MB33; -.
DR GeneID; 107935936; -.
DR KEGG; ghi:107935936; -.
DR OrthoDB; 933627at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 3.30.40.100; -; 1.
DR Gene3D; 2.40.330.10; DNA-binding pseudobarrel domain; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR011124; Znf_CW.
DR PANTHER; PTHR46245; B3 DOMAIN-CONTAINING PROTEIN OS07G0563300; 1.
DR PANTHER; PTHR46245:SF2; B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL2; 1.
DR Pfam; PF02362; B3; 1.
DR Pfam; PF07496; zf-CW; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; DNA-binding pseudobarrel domain; 1.
DR PROSITE; PS50863; B3; 1.
DR PROSITE; PS51050; ZF_CW; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 320..421
FT /note="TF-B3"
FT /evidence="ECO:0000259|PROSITE:PS50863"
FT DOMAIN 585..635
FT /note="CW-type"
FT /evidence="ECO:0000259|PROSITE:PS51050"
FT REGION 738..809
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 758..790
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 791..807
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 916 AA; 101310 MW; D0D0D0832F1010CF CRC64;
MASKSCMNVL CGASTSIEWR NGWTLRSGDF ASLCDKCGSA YEQSIFCDVF HSKDSGWRDC
NSCGKPLHCG CIASRFLLEL LDGGGINCVS CAKKSGFNHM IEDEKPNEFC MVKADADQLH
STSADNQLSG ASIENLQLMQ LSNNAESIGL RQLLQLHNDD SSGSLGQMKQ EEFLPPREIG
STCLTSINQA SNGSVQAVKP TTSKVNIFDS LPQTNLSISL GGSLGNQHGF PSSVVDEKSK
MSSVLQQASK SCHLLPKPPR SVLATGLEMN AGMVPQIRVA RPPAEGRGRN QLLPRYWPRI
TDQELQQISG DSNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QPEGLPLRIQ
DVKGKEWVFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRKDPE GKLVMGFRKA
TNTAVVQETL PPAIPNGTLS SESYFSGVFE NLPIISGYSG LLQSLKGSTD PHLNGLSKHS
RLAGGDISGH KSDMHEDRIR EDLLLPSMLT PERKRTRNIG SKSKRLLIDS QDALELKLTW
EEAQDLLHPP PSTKPSIVTI EDHDFEEYDE PPVFGKRSIF AVRSTGGQEQ WAQCDNCSKW
RRVPVDALLP PKWTCADNNW DQSRSSCSLP DELTPRELEI LLRLNRDFKK RRIIAFHRQT
QEHESSPGLN ALANAAILGD NVADSGTTPV ATTTKHPRHR PGCSCIVCIQ PPSGKGKHKP
TCTCNVCLTV KRRFKTLMMR KKKRQSEREA EIALRNQQAW RPREEAEVES SSKHVSSHHD
PSENEARSVN ELESKNQSNN NKLVSKSVEA NKGRIDLNCD PCRDDDSQFA SSTRMSMMNL
LHVASLPLET YLKENGLTSL VSDQQAILTS HAPPQAGNTS EPHDDQCFHS ATKEHETRDE
VNIETKTVRI NNEIDP
//