ID A0A1U8MHA6_GOSHI Unreviewed; 1035 AA.
AC A0A1U8MHA6;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Lysine-specific demethylase JMJ25-like isoform X4 {ECO:0000313|RefSeq:XP_016726225.1, ECO:0000313|RefSeq:XP_016726226.1};
GN Name=LOC107937768 {ECO:0000313|RefSeq:XP_016726225.1,
GN ECO:0000313|RefSeq:XP_016726226.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016726226.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016726225.1, ECO:0000313|RefSeq:XP_016726226.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016726225.1,
RC ECO:0000313|RefSeq:XP_016726226.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01002}.
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DR RefSeq; XP_016726225.1; XM_016870736.1.
DR RefSeq; XP_016726226.1; XM_016870737.1.
DR GeneID; 107937768; -.
DR OrthoDB; 3473445at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032454; F:histone H3K9 demethylase activity; IEA:InterPro.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR045109; JHDM2-like.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR014977; WRC_dom.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12549; JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; 1.
DR PANTHER; PTHR12549:SF42; PROTEIN B160; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF08879; WRC; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51667; WRC; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 7..51
FT /note="WRC"
FT /evidence="ECO:0000259|PROSITE:PS51667"
FT DOMAIN 245..291
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 684..991
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 124..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 444..467
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 806..852
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..155
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 445..464
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1035 AA; 117333 MW; 82BE566F3426BC1C CRC64;
MEGEGAIPDH LRCNRTDGRQ WRCKRRVMEG KKLCELHHIQ GRHRQNKQKV PESLKMQRKK
RKKKVFEKNK LEIRAKLLKL ARPVKRKRVI GGESEALDEA VRKMKLKRGD LPLELIRMVL
KREAEKKKKK RKESECSDFD DDDDDDDDDD DDEKGDLMRE LPNGLMAISS SSPHFDNAGS
CSGSGSASGS GSVSGSCINV KVGETDNNAV AITRRRFRSK NIEPLPVGTL QKNGANLRRG
RRIRCHWCRK GGAPNLIKCS SCKQQFFCLD CIKEHYFFKR EEVQVACPVC RGTCSCRACS
VSQRRDDECK EFLRDKIKVD KVLDFHYLIC MLLPVFKQIN QDQSVEIDVE AKIQGKKLCD
IQVQPAESGG NKEYCCSYCK TLILDFHRSC PKCSYSLCLS CCRDIFQGNL FGTIKEVNCK
CPKRRKTCLP GICLSDRKSV RITRQTSDSR YSDSSVSLPS QKAPDGSVPI SCPPSEFGGC
GDGLLDLRCI LPQSWFKELE VSAEEIVGSY ELPEAFDTFS CCSLCPATDD EAKRVKQLQE
ASRRENSNDN FLFYPTILNI HGDNLEHFQK HWCKGHPVIF RNVLQTTALS WDPIFLFCSY
LKNSVAKAEN EEPSKATTCS DWFEVEIGIK QLFLGSLRGL AQSSMCDEKL KLKGWLSSPL
FQEQFPDHYS EIIQSLPLRE YMNPGSGILN IAARLPQEIT KPDLGPSVSI SYCSSEELAQ
ANSVTNLCYG LCDMVNVLAH ATDAPVCMKQ LNKIRKLMKK KKFQDERELA KTHLDQKMAN
ELKEKSKSNG ENIKVGLNGM INKEMHSRNT VPKLSRSPSA VHDAHDKEDS SDSDSDSDSD
CNSNSEAALH PCDTIHGSEA LEDQEIFGKR TDLAKSCGAE WDVFRRQDVP KLMEYLRKHS
NEFGHTCGFQ KHVVHPILDQ NFFLDTSHKR RLKEEYEIEP WTFEQHVGEA IIIPAGCPYQ
IRNVKSCVNV VLDFVSPENV TECIRLINEF RLLPDDHKAK AKKFEVEKMA LYRISAAIKE
IRELICSESS AELSE
//