ID A0A1U8MIY0_GOSHI Unreviewed; 895 AA.
AC A0A1U8MIY0;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Transcriptional corepressor LEUNIG-like isoform X5 {ECO:0000313|RefSeq:XP_016725529.1};
GN Name=LOC107937190 {ECO:0000313|RefSeq:XP_016725529.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016725529.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016725529.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016725529.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_016725529.1; XM_016870040.1.
DR AlphaFoldDB; A0A1U8MIY0; -.
DR GeneID; 107937190; -.
DR OrthoDB; 1410379at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR45093; TRANSCRIPTION ACTIVATOR MSS11; 1.
DR PANTHER; PTHR45093:SF2; TRANSCRIPTION ACTIVATOR MSS11; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 5.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 607..648
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 649..684
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 692..734
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 778..818
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 863..895
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 128..167
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 220..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 415..538
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 229..260
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..455
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 462..522
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 895 AA; 97886 MW; 1D0808B5A18BF3B8 CRC64;
MSQTNWEADK MLDVYIHDYL VKRDLKASAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW
DIFIARTNEK HSEVAASYIE TQLIKAREQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ
QQQQQQQQQQ QPPQQSQQAQ QPQQRRDGSH LLNGNTNGLV GNDSLIRQPA GTANAMATKM
YEERLKLPHQ RDSLDDAAMK QRYGDNVGQL LDPNHASILK PAAATGPTSG QVLHGTAGGM
SPQVQARSQQ LPGTTPDIKS EMNPVLNPRA AGPDGSLMGI PGSNQGGNNL TLKGWPLTGL
DQLRGGILQP QKSFMQAPQP FHQLQMLTPQ HQQLMLAQQN LTSPSGSDDN RRLRMLLNNN
RTMGLGKDGL SNSVGDVVPN VSPLQAGSPL MPRGDTEMLM KLKLAQLHQQ QQQQQQLQQQ
QQQNSNSQQQ QLQQHALSNQ QSQSSNPSLH QQDKVGGGGS VTVDGSMSNS FRGNDQVSKN
QNGRKRKQPV SSSGPANSSG TANTAGPSPS SAPSTPSTHT PGDVISMPAM PHSGSSSKPL
MMFGAEGAGT LASPSNQLAE MDRFVEDGSL DDNVESFLSH DDTDPRDAVG RCMDVTKGFT
FMEVNSVRAS SSKVTCCHFS SDGKLLATGG HDKKAVLWYT DTLKPKSTLE EHSCLITDVR
FSPSMSRLAT SSFDKTVRVW DADSPGYSLR TFMGHSGNVM SLDFHPTKDD LICSCDGDGE
IRYWSINNGN CARAFKGGTA PGTAQLRFQP RLGKYLAAAA ENVVSILDTE TQTCWHSLQG
HTKLIHSVCW DPSGELLASV SEDSVRVWSF ASGSEGECVH ELSCNGNKFH SCVFHPSFQS
LLVIGCYQSL ELWNMSENKT MTLSAHEGLI AALAVSPVTR LVSSASHDKF VKLWK
//
