ID A0A1U8MR85_GOSHI Unreviewed; 371 AA.
AC A0A1U8MR85;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Uncharacterized protein LOC107940448 {ECO:0000313|RefSeq:XP_016729366.1};
GN Name=LOC107940448 {ECO:0000313|RefSeq:XP_016729366.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016729366.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016729366.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016729366.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016729366.1; XM_016873877.1.
DR AlphaFoldDB; A0A1U8MR85; -.
DR STRING; 3635.A0A1U8MR85; -.
DR PaxDb; 3635-A0A1U8MR85; -.
DR GeneID; 107940448; -.
DR KEGG; ghi:107940448; -.
DR OrthoDB; 714620at2759; -.
DR Proteomes; UP000189702; Chromosome 5.
DR CDD; cd00303; retropepsin_like; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR PANTHER; PTHR45643; REVERSE TRANSCRIPTASE; 1.
DR PANTHER; PTHR45643:SF11; RNA-DIRECTED DNA POLYMERASE; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF08284; RVP_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 33..83
FT /note="Retrotransposon gag"
FT /evidence="ECO:0000259|Pfam:PF03732"
SQ SEQUENCE 371 AA; 42416 MW; 8929EB0CBB1DFCC5 CRC64;
MNDIDCTLEQ KLKGAVSLLR DEAYQWWLLI EEEKYVGTSY VDARRHEFMN LTKGDKSVAE
YEAEFLRLSR YAQGMVASEC EKCRAVQHPP RSHRPARGGN GSTRSYVASI VSKTMGISIE
RTSSEVIVLS SLGQFVRVSK LYRDVSLDVQ GVVFLENLME LPFEELDLIL GMDWLSTECE
AYMAFISVSV YGDSFIGNNI TVRDFLDVFF EKLLGLHSNQ EVEFRIELLP STALTEDEHD
EQLRVVLQIL RGKQLYVKLS KCELWLRDVT FLGHMFSAEG IRVDLKKIEI ALDWKQTKNV
SEIHSFLGLA GYYRCFVEGF SLIAAPLTKL LHKGIPFVWI DAQQASFEKL KSILIQAPVL
IRPEFDKEFV V
//
