ID A0A1U8MU20_GOSHI Unreviewed; 840 AA.
AC A0A1U8MU20;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X2 {ECO:0000313|RefSeq:XP_016730322.1};
GN Name=LOC107941274 {ECO:0000313|RefSeq:XP_016730322.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016730322.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016730322.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016730322.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
CC {ECO:0000256|ARBA:ARBA00008438}.
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DR RefSeq; XP_016730322.1; XM_016874833.1.
DR AlphaFoldDB; A0A1U8MU20; -.
DR GeneID; 107941274; -.
DR OrthoDB; 11932at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd18008; DEXDc_SHPRH-like; 1.
DR CDD; cd16449; RING-HC; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR014905; HIRAN.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45626:SF45; DNA REPAIR PROTEIN RAD5A; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF08797; HIRAN; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00910; HIRAN; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 413..630
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 802..840
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 303..323
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 445..470
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 304..321
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 840 AA; 93034 MW; 37CFD00FDC89C62F CRC64;
MGGNKVSEDL ISTVRLIVGS DYSEMDIIRA LHLAKHDATA AINIIFDSPR SFKPREKQIE
PESEPVVRIS SSDISTVSVK PKKTGKENKD FSFSSNGNVA CGGNDLEDEG NVRLENDWGF
VGSSEVPGLS TSKGRKIKVG EEVSFTFPLK GTGSSPAGSM GKGFGKGRAA AACSEIVRFS
TKNFGEIGRI PNEWARCLLP LVRDKKIRVE GRCKSAPDVL GVMDTVLLLL SVYINSSMFH
KYQQTSLKAA SNCNDESIVH PLPSLFRLLG LTPFKKAELA PGDLYTKKRP LETKDGSGIH
TPLLTANKFK NPSQNGNEVE NDESISDADL ENIVGVGDNS ELEEMDPPST LQCELRPYQK
QALQWMFQVE KGNCMDEAAT TLHPCWEAYR LADRRDPVIY LNAFTGDATI EFPSTHQMAR
GGILADAMGL GKTIMTISLL ATHSERGGLS DSQSSDQPSD QGGEAIDVFS QSPNSVKTAT
KFPGFDKLSK QRNKLANGGN LIICPMTLLG QWKAEIETHV QPGSLSLYVH YGQSRPKDAK
LLAQNDVVIT TYGVLASEFS AENSEDNGGL YSVRWFRIVL DEAHTIKSSK SQISMAAAAL
VADRRWCLTG TPIQNKLEDL YSLLRFLKVE PWGNWPWWNK LIQKPFEEGD QRGLKLVQSI
LKPIMLRRTK CSTDRYGKPI LVLPPADVQV IYCELSEAEK DFYEALFKRS KVKFDQFVEQ
GRVLHNYASI LELLLRLRQC CDHPFLVMSR GDTQEYTDLN KLAKRFLRGG QSTLDGEAKD
LPSRAYVQEV VEELRKGEQG ECPICLEAFE DAVLTPCAHR LCRECLLASW RNPNSGLCPV
//