ID A0A1U8MVH5_GOSHI Unreviewed; 673 AA.
AC A0A1U8MVH5;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Zinc finger BED domain-containing protein DAYSLEEPER-like {ECO:0000313|RefSeq:XP_016730818.1, ECO:0000313|RefSeq:XP_016730820.1};
GN Name=LOC107941736 {ECO:0000313|RefSeq:XP_016730818.1,
GN ECO:0000313|RefSeq:XP_016730820.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016730820.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016730818.1, ECO:0000313|RefSeq:XP_016730820.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016730818.1,
RC ECO:0000313|RefSeq:XP_016730820.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_016730818.1; XM_016875329.1.
DR RefSeq; XP_016730820.1; XM_016875331.1.
DR STRING; 3635.A0A1U8MVH5; -.
DR PaxDb; 3635-A0A1U8MVH5; -.
DR GeneID; 107941736; -.
DR KEGG; ghi:107941736; -.
DR OrthoDB; 449308at2759; -.
DR Proteomes; UP000189702; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0009791; P:post-embryonic development; IEA:UniProt.
DR InterPro; IPR045259; DAYSLEEPER-like.
DR InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR23272; BED FINGER-RELATED; 1.
DR PANTHER; PTHR23272:SF52; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF14372; hAT-like_RNase-H; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 34..94
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 97..120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 673 AA; 76433 MW; 45D943BF1DF15F9C CRC64;
MAEMTEATNM ETSPVENNNE LALITPETQP KRRKKKSMVW EYFTIETVSA GCRRACCNRC
KQSFAYSTGS KVAGTSHLKR HIAKGTCPAL LRDQYNNQLT PYSPKTGGGE PRKRRYRSPS
SPFIPFDQDR CRHEIARMII MYEYPLHMVE HPGFIAFVQN LQPRFDKVSF NTVQGDCVAT
YLREKQSLMK LIEGIPGRVC LTLDMWTSNQ TLGYVFITGH FIDFEWKLQR RVLNVIMEPY
PDSDSALSHA VAACLSDWSL EGKLFSLIFN HPTSEAGLEN LRPLLCTKNP LILNGQLLLG
NCIARNLSSM AKDVLGAGHE IVKKIRDSVK YVKTSESHDE KFVQVKNQLQ VPSEKSLILD
NQNQWNTTYQ MLAAASELKE VFNCLDTSDP DYKLAPSMED WKVAETLCTF LKPLFDAASI
LMTTTNPTAI TFFHEAWKIH ADLGRSIAND DPFISNIAKS MLEKIDKYWK DCSLILAIAV
VMDPRFKMKL VEFSFTKIFG EDAPTYIKIV DDGIHELFLE YVALPLPLTP TYTEEGNVGN
NGKTDESQQG NLLSDQGLTD FDVYIMETSS QQMKSELDQY LEESLLPRVQ EFDVLGWWKL
NKMKYPTLSK MARDILSIPV SAAAPDSVFD IIIKQLDEYR SSLRPETVEA LICAKDWLHH
GSEESNALVK MEF
//
