ID A0A1U8NEE2_GOSHI Unreviewed; 725 AA.
AC A0A1U8NEE2;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=DDT domain-containing protein DDR4-like isoform X1 {ECO:0000313|RefSeq:XP_016736323.1};
GN Name=LOC107946488 {ECO:0000313|RefSeq:XP_016736323.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016736323.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016736323.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016736323.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016736323.1; XM_016880834.1.
DR AlphaFoldDB; A0A1U8NEE2; -.
DR OrthoDB; 947548at2759; -.
DR Proteomes; UP000189702; Chromosome 5.
DR GO; GO:0031213; C:RSF complex; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR028938; Rsf1-like.
DR InterPro; IPR028942; WHIM1_dom.
DR PANTHER; PTHR14296; REMODELING AND SPACING FACTOR 1; 1.
DR PANTHER; PTHR14296:SF3; REMODELING AND SPACING FACTOR 1; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF15612; WHIM1; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 134..179
FT /note="DDT"
FT /evidence="ECO:0000259|Pfam:PF02791"
FT DOMAIN 225..255
FT /note="WHIM1"
FT /evidence="ECO:0000259|Pfam:PF15612"
FT REGION 1..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 418..725
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 23..68
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..90
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 91..107
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 443..462
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 466..502
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 503..518
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 519..540
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 541..564
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 565..598
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 611..659
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 667..688
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 725 AA; 82460 MW; F130AE7E367B743D CRC64;
MSLDSSPSLP IPSDPPQNDT LPPQNDTPTQ TPDATPIPPL TRSNRPSRAC TIRASQRLYA
QQQQAAIERR QKQAKKDQQH NHHQPKQPKD DSDGSSSPQQ QCGGNSKIVT PLVAPPEPSQ
LPRWTIRSMW ELASVLNFLH VFRPLLNIAV EFSAEEFETA LITPNYTLAD IHIPLLKAIP
PITRMPLTRD TWVTVLCRKL RDWWHWVADG DLPIVASHGT EIELYKSLDP GVRVVILKAL
CDIRVEQDDI RSYIDNSLKH GVQLSAFRKE RLGGHSPGIN YWYEDDAVVG HRLYREIRKV
ELKKAKMKGS HVLNSATYLW ETVATNFEEF QDISEKLFAS KNRTEASLGK KLKNDMLPEI
EKEHKRKERL LKKQHRQALL LDNFLAVDGL GPGRSLRDRK PVTYTFDDYD RSINEAIKIT
KRKAPSPDPL NGRDVAKSEP SVNGKLSGPS HGSEQDSYNL PSPKSPEYDD FDDNKSGELD
RSNRRRQRPQ RYSAKEFVEA VSDNEADFDS DDDIVGEAVY DEEYLRKRKQ RRQSSSSEGD
EEYRWDEENA EDEEEEEEDS LSISEDSDEA PKVKKLPGRT RRETKLRSVD ELQSGLRRSK
RATRNRINYR QYELSESETE SKPEKSNPSD EHSDASEKEE FSEGSQDSNG SDDEQEMKVN
PTMEGNSDPV EKEQSQAPEQ SSGSGQDEAD GAQKRRFLDL NELAPGSGCD DGPNTIMKDE
DRNDF
//
