ID A0A1U8NFU1_GOSHI Unreviewed; 463 AA.
AC A0A1U8NFU1;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Uncharacterized protein LOC107947892 {ECO:0000313|RefSeq:XP_016737885.1};
GN Name=LOC107947892 {ECO:0000313|RefSeq:XP_016737885.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016737885.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016737885.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016737885.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016737885.1; XM_016882396.1.
DR AlphaFoldDB; A0A1U8NFU1; -.
DR PaxDb; 3635-A0A1U8NFU1; -.
DR Proteomes; UP000189702; Chromosome 6.
DR CDD; cd00303; retropepsin_like; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR032567; LDOC1-rel.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR15503; LDOC1 RELATED; 1.
DR PANTHER; PTHR15503:SF43; REVERSE TRANSCRIPTASE RNASE H-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF08284; RVP_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 249..287
FT /note="Reverse transcriptase/retrotransposon-derived
FT protein RNase H-like"
FT /evidence="ECO:0000259|Pfam:PF17919"
FT REGION 1..28
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 463 AA; 53227 MW; A43C948E0664F788 CRC64;
MATAPPLRVV QHPPRSCGQA RSGNSLGRGQ RALGRGILVE STTSEVIVLS PLGQPVRVNK
MFRDVPLEVQ WAIFLADMMK LPFGEFDMIL GMDWDSSVRD IKMIKDFLDV FHKELPGLPL
NREVEFEIEF LFGTVLVSIA PYRMVLKEPV ELKAQIQELL DRGFICPSVS SWGAPVLFVK
KKDGSMQICI DYRQLNKLTI KNNYPLSRID DLFDHFLGLV GYYRCFVEGF SLIAAPLTKL
LRKGMPFNWT DVQQESFEKL KIVLIEAPVL IQLEPEKEFT VYSDASHIKG KQLEDKSLGI
RFLQIESGDT VDFGLNSEGK LAKLYMSEIV RLHGVLVSIY LIGILASRLD FGKSYMRLWV
QDLKHREIEF SMGDFVFLKL LPWKKVLRFE RKGKLSTRFI GPYRILKCVG PISYQLELPP
ELDQIHDVFH VPMLRRYYYD PTHIVPVKEI EVRPDLTFEE EPV
//
