ID A0A1U8NJE2_GOSHI Unreviewed; 746 AA.
AC A0A1U8NJE2;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Protein transport protein SEC24-like {ECO:0000313|RefSeq:XP_016739232.1};
GN Name=LOC107949035 {ECO:0000313|RefSeq:XP_016739232.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016739232.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016739232.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016739232.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000256|ARBA:ARBA00008334}.
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DR RefSeq; XP_016739232.1; XM_016883743.1.
DR AlphaFoldDB; A0A1U8NJE2; -.
DR STRING; 3635.A0A1U8NJE2; -.
DR PaxDb; 3635-A0A1U8NJE2; -.
DR GeneID; 107949035; -.
DR KEGG; ghi:107949035; -.
DR OrthoDB; 10616at2759; -.
DR Proteomes; UP000189702; Chromosome 6.
DR GO; GO:0030127; C:COPII vesicle coat; IBA:GO_Central.
DR GO; GO:0070971; C:endoplasmic reticulum exit site; IBA:GO_Central.
DR GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IBA:GO_Central.
DR GO; GO:0090110; P:COPII-coated vesicle cargo loading; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR Gene3D; 1.20.120.730; Sec23/Sec24 helical domain; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR Gene3D; 2.30.30.380; Zn-finger domain of Sec23/24; 1.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR PANTHER; PTHR13803:SF17; OS05G0443300 PROTEIN; 1.
DR PANTHER; PTHR13803; SEC24-RELATED PROTEIN; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR SUPFAM; SSF81995; beta-sandwich domain of Sec23/24; 1.
DR SUPFAM; SSF81811; Helical domain of Sec23/24; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR SUPFAM; SSF82919; Zn-finger domain of Sec23/24; 1.
PE 3: Inferred from homology;
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 51..83
FT /note="Zinc finger Sec23/Sec24-type"
FT /evidence="ECO:0000259|Pfam:PF04810"
FT DOMAIN 121..374
FT /note="Sec23/Sec24 trunk"
FT /evidence="ECO:0000259|Pfam:PF04811"
FT DOMAIN 500..612
FT /note="Sec23/Sec24 helical"
FT /evidence="ECO:0000259|Pfam:PF04815"
SQ SEQUENCE 746 AA; 83046 MW; D3422C8EEFAA427C CRC64;
MAVRATVTRF PIDSDAQEAC GIPWGLTVTP FAAKDENGQA PVYGSDGHLL PRCENCYAYF
NTYCELDQWA WNCSLCGTLN GLSSEAIARY SRPQSCAEMM SSFVDLEFPL EGSEEEILHA
RPVYVAAVDL SSSEEFLELT KSALQAALEA LAPESLFGLA TFSHKLGLYD VQGPIPVVKN
VFIPQDAEGT LPIELEDVMP LLQFLAPVDT CKDRITSALE ILRPTTSWER TPPGTGQELD
GVLMGGRGFG MAMEALCNYL GSEYGNTFAL ARVFAFLSGP PDHGPGQLDT RRYGEQYASK
GEDADRALLP EQTPFYKDLA AVAVQAGVCV DIFAVTNEYT DLASLKFLSI ESGGSLFLYS
NTDDSTLPQD MYRMLSRPYA FNCVLRLRTS TEFKPGHSYG HFFPDPQYEN VQHIICCDSY
ATYAYDFEFA NNVGFSRHSS EQPMVQIAFQ YTVVVPPEEL PGSELLSSSR GKHSIKRRLR
IRTLQYGTAR NLNELYDSVD PEVVLSLLVH KVILASLEEG VREGRMLLHD WLVILTSQYN
EAFNLIQYKN GSSSIMGQLD VTFSQCPQLQ PLPPLVFALL RNPLLRFHEE GVHPDYRIYV
QCLFSALEPS SLHRAIYPVL TSYSTPDKQA YPRHSLSRAA LITSGSPIFF LDAYTTLIVF
YSSTADPSLP FPPPHDCLLR STINKLKQER CITPKLIFIR GGQDDASVFE NYLIEEQDVN
GTGLTSVMGF VSFLEDITQS VLEYMK
//
