ID A0A1U8NKR4_GOSHI Unreviewed; 297 AA.
AC A0A1U8NKR4;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Polyadenylate-binding protein-interacting protein 9-like {ECO:0000313|RefSeq:XP_016738469.1};
GN Name=LOC107948438 {ECO:0000313|RefSeq:XP_016738469.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016738469.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016738469.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016738469.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016738469.1; XM_016882980.1.
DR AlphaFoldDB; A0A1U8NKR4; -.
DR STRING; 3635.A0A1U8NKR4; -.
DR PaxDb; 3635-A0A1U8NKR4; -.
DR GeneID; 107948438; -.
DR KEGG; ghi:107948438; -.
DR OMA; VEFTNEH; -.
DR OrthoDB; 298220at2759; -.
DR Proteomes; UP000189702; Chromosome 6.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12459; RRM1_CID8_like; 1.
DR CDD; cd12460; RRM2_CID8_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR009818; Ataxin-2_C.
DR InterPro; IPR034823; CID8-like_RRM1.
DR InterPro; IPR034825; CID8-like_RRM2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR32343:SF22; POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 9; 1.
DR PANTHER; PTHR32343; SERINE/ARGININE-RICH SPLICING FACTOR; 1.
DR Pfam; PF07145; PAM2; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 112..187
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 209..285
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..28
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 63..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 63..95
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 297 AA; 33210 MW; 9B4AE0D991481450 CRC64;
MAAVVDNSGE AVEAAKNNDL EVETTKSESK EFNVQNLVDM FTKLNPLAKE FFPSYFHHNQ
TKKSDNFNQV PVKQSAGNEN FSNKRGRNNV NQGRRRLNGR AFRAQRDDSI RRTVYVSDID
QTITEEQLAG LFSNCGQVVD CRVCGDPHSV LRFAFVEFAD EQGARAALSL DGTMLGFYPV
RVLPSKTAIL PVNPTFLPRS ENEREMCTRT VYCTNIDKKV SQTEMKSFFE STCGEVSRLR
LLGDQVHSTR IAFVEFAMAE SAIIALNCSG LVLGTQAIRV SPSKTPVRPR VTRPTLR
//
