ID A0A1U8NLP8_GOSHI Unreviewed; 441 AA.
AC A0A1U8NLP8;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Nuclear pore complex protein NUP50A-like {ECO:0000313|RefSeq:XP_016739779.1, ECO:0000313|RefSeq:XP_016739780.1};
GN Name=LOC107949582 {ECO:0000313|RefSeq:XP_016739779.1,
GN ECO:0000313|RefSeq:XP_016739780.1};
GN Synonyms=LOC107951997 {ECO:0000313|RefSeq:XP_016742692.1,
GN ECO:0000313|RefSeq:XP_016742693.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016739780.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016739779.1, ECO:0000313|RefSeq:XP_016739780.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016739779.1,
RC ECO:0000313|RefSeq:XP_016739780.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|ARBA:ARBA00004567}.
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DR RefSeq; XP_016739779.1; XM_016884290.1.
DR RefSeq; XP_016739780.1; XM_016884291.1.
DR RefSeq; XP_016742692.1; XM_016887203.1.
DR RefSeq; XP_016742693.1; XM_016887204.1.
DR STRING; 3635.A0A1U8NLP8; -.
DR PaxDb; 3635-A0A1U8NLP8; -.
DR GeneID; 107951997; -.
DR KEGG; ghi:107951997; -.
DR OrthoDB; 307490at2759; -.
DR Proteomes; UP000189702; Chromosome 7.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005643; C:nuclear pore; IBA:GO_Central.
DR GO; GO:0046907; P:intracellular transport; IEA:InterPro.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR CDD; cd13169; RanBD_NUP50_plant; 1.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR InterPro; IPR015007; NUP2/50/61.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR000156; Ran_bind_dom.
DR InterPro; IPR045207; RanBD_NUP50_plant.
DR InterPro; IPR045255; RanBP1-like.
DR PANTHER; PTHR23138:SF142; NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED; 1.
DR PANTHER; PTHR23138; RAN BINDING PROTEIN; 1.
DR Pfam; PF08911; NUP50; 1.
DR Pfam; PF00638; Ran_BP1; 1.
DR SMART; SM00160; RanBD; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
DR PROSITE; PS50196; RANBD1; 1.
PE 4: Predicted;
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nuclear pore complex {ECO:0000256|ARBA:ARBA00023132};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein transport {ECO:0000256|ARBA:ARBA00023132};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Translocation {ECO:0000256|ARBA:ARBA00023010};
KW Transport {ECO:0000256|ARBA:ARBA00022816}.
FT DOMAIN 303..420
FT /note="RanBD1"
FT /evidence="ECO:0000259|PROSITE:PS50196"
FT REGION 1..236
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..54
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..71
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 84..108
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 110..134
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 141..225
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 441 AA; 46921 MW; 409E6A0595550CBA CRC64;
MGDAENALPP SKKRAAGREI SRDNPGLDDE EDSSEQETGT FKRASEEVLA NRRIVKVRRN
QTTSTASANP FSGIRLVPLT EPTATPAAPS SAPESGTITT QVTADAPISS EKEISEDGKN
NVNESEKSEE GNDLEPEKNS DETEPDNAKS ESENIKQSES KKDEPVSDAV ADKESAEHKS
SVAVNEETQK EANDEKLAGV EAKDEDKKGD ETANADNKDK SSENADSTAE GASLSSFQQL
SSSQNAFTGL AGTGFSTSSF SFGSATKDGP TGAFGFGLST NGNSSLFNTS GTSIVSKSEG
SGFPALQEVP VETGEENEKV VFSADSVLFE FIDGGWKERG KGELKVNVST AGAERARLLM
RARGNYRLIL NASLYPDMKL TNMDKRGITF VCMNSTGEDK EGLSTLALKF KDASIVEEFR
VAVMAHKGNT ATVLKTPEHS P
//