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Database: UniProt
Entry: A0A1U8NLP8_GOSHI
LinkDB: A0A1U8NLP8_GOSHI
Original site: A0A1U8NLP8_GOSHI 
ID   A0A1U8NLP8_GOSHI        Unreviewed;       441 AA.
AC   A0A1U8NLP8;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   24-JAN-2024, entry version 28.
DE   SubName: Full=Nuclear pore complex protein NUP50A-like {ECO:0000313|RefSeq:XP_016739779.1, ECO:0000313|RefSeq:XP_016739780.1};
GN   Name=LOC107949582 {ECO:0000313|RefSeq:XP_016739779.1,
GN   ECO:0000313|RefSeq:XP_016739780.1};
GN   Synonyms=LOC107951997 {ECO:0000313|RefSeq:XP_016742692.1,
GN   ECO:0000313|RefSeq:XP_016742693.1};
OS   Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016739780.1};
RN   [1] {ECO:0000313|Proteomes:UP000189702}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX   PubMed=25893780; DOI=10.1038/nbt.3208;
RA   Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA   Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA   Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA   Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA   Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT   "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT   provides insights into genome evolution.";
RL   Nat. Biotechnol. 33:524-530(2015).
RN   [2] {ECO:0000313|RefSeq:XP_016739779.1, ECO:0000313|RefSeq:XP_016739780.1}
RP   IDENTIFICATION.
RC   TISSUE=Leaf {ECO:0000313|RefSeq:XP_016739779.1,
RC   ECO:0000313|RefSeq:XP_016739780.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC       {ECO:0000256|ARBA:ARBA00004567}.
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DR   RefSeq; XP_016739779.1; XM_016884290.1.
DR   RefSeq; XP_016739780.1; XM_016884291.1.
DR   RefSeq; XP_016742692.1; XM_016887203.1.
DR   RefSeq; XP_016742693.1; XM_016887204.1.
DR   STRING; 3635.A0A1U8NLP8; -.
DR   PaxDb; 3635-A0A1U8NLP8; -.
DR   GeneID; 107951997; -.
DR   KEGG; ghi:107951997; -.
DR   OrthoDB; 307490at2759; -.
DR   Proteomes; UP000189702; Chromosome 7.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005643; C:nuclear pore; IBA:GO_Central.
DR   GO; GO:0046907; P:intracellular transport; IEA:InterPro.
DR   GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   CDD; cd13169; RanBD_NUP50_plant; 1.
DR   Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR   InterPro; IPR015007; NUP2/50/61.
DR   InterPro; IPR011993; PH-like_dom_sf.
DR   InterPro; IPR000156; Ran_bind_dom.
DR   InterPro; IPR045207; RanBD_NUP50_plant.
DR   InterPro; IPR045255; RanBP1-like.
DR   PANTHER; PTHR23138:SF142; NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED; 1.
DR   PANTHER; PTHR23138; RAN BINDING PROTEIN; 1.
DR   Pfam; PF08911; NUP50; 1.
DR   Pfam; PF00638; Ran_BP1; 1.
DR   SMART; SM00160; RanBD; 1.
DR   SUPFAM; SSF50729; PH domain-like; 1.
DR   PROSITE; PS50196; RANBD1; 1.
PE   4: Predicted;
KW   mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW   Nuclear pore complex {ECO:0000256|ARBA:ARBA00023132};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Protein transport {ECO:0000256|ARBA:ARBA00023132};
KW   Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Translocation {ECO:0000256|ARBA:ARBA00023010};
KW   Transport {ECO:0000256|ARBA:ARBA00022816}.
FT   DOMAIN          303..420
FT                   /note="RanBD1"
FT                   /evidence="ECO:0000259|PROSITE:PS50196"
FT   REGION          1..236
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        36..54
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        56..71
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        84..108
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        110..134
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        141..225
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   441 AA;  46921 MW;  409E6A0595550CBA CRC64;
     MGDAENALPP SKKRAAGREI SRDNPGLDDE EDSSEQETGT FKRASEEVLA NRRIVKVRRN
     QTTSTASANP FSGIRLVPLT EPTATPAAPS SAPESGTITT QVTADAPISS EKEISEDGKN
     NVNESEKSEE GNDLEPEKNS DETEPDNAKS ESENIKQSES KKDEPVSDAV ADKESAEHKS
     SVAVNEETQK EANDEKLAGV EAKDEDKKGD ETANADNKDK SSENADSTAE GASLSSFQQL
     SSSQNAFTGL AGTGFSTSSF SFGSATKDGP TGAFGFGLST NGNSSLFNTS GTSIVSKSEG
     SGFPALQEVP VETGEENEKV VFSADSVLFE FIDGGWKERG KGELKVNVST AGAERARLLM
     RARGNYRLIL NASLYPDMKL TNMDKRGITF VCMNSTGEDK EGLSTLALKF KDASIVEEFR
     VAVMAHKGNT ATVLKTPEHS P
//
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