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Database: UniProt
Entry: A0A1U8NPJ2_GOSHI
LinkDB: A0A1U8NPJ2_GOSHI
Original site: A0A1U8NPJ2_GOSHI 
ID   A0A1U8NPJ2_GOSHI        Unreviewed;       922 AA.
AC   A0A1U8NPJ2;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   24-JAN-2024, entry version 28.
DE   SubName: Full=Chaperone protein ClpC1, chloroplastic-like {ECO:0000313|RefSeq:XP_016739859.1, ECO:0000313|RefSeq:XP_016739860.1};
GN   Name=LOC107949637 {ECO:0000313|RefSeq:XP_016739859.1,
GN   ECO:0000313|RefSeq:XP_016739860.1};
OS   Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016739859.1};
RN   [1] {ECO:0000313|Proteomes:UP000189702}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX   PubMed=25893780; DOI=10.1038/nbt.3208;
RA   Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA   Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA   Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA   Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA   Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT   "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT   provides insights into genome evolution.";
RL   Nat. Biotechnol. 33:524-530(2015).
RN   [2] {ECO:0000313|RefSeq:XP_016739859.1, ECO:0000313|RefSeq:XP_016739860.1}
RP   IDENTIFICATION.
RC   TISSUE=Leaf {ECO:0000313|RefSeq:XP_016739859.1,
RC   ECO:0000313|RefSeq:XP_016739860.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|RuleBase:RU004432}.
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DR   RefSeq; XP_016739859.1; XM_016884370.1.
DR   RefSeq; XP_016739860.1; XM_016884371.1.
DR   STRING; 3635.A0A1U8NPJ2; -.
DR   PaxDb; 3635-A0A1U8NPJ2; -.
DR   GeneID; 107949637; -.
DR   KEGG; ghi:107949637; -.
DR   OrthoDB; 275944at2759; -.
DR   Proteomes; UP000189702; Chromosome 7.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR   GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 4.10.860.10; UVR domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001943; UVR_dom.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
DR   PROSITE; PS50151; UVR; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          92..234
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   DOMAIN          508..543
FT                   /note="UVR"
FT                   /evidence="ECO:0000259|PROSITE:PS50151"
FT   COILED          497..560
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   922 AA;  102237 MW;  66DBF5DAD2F5570B CRC64;
     MAKILAQSAI VPTLLTSRSH GASKESGKPK RSAKMMCSLQ TPGLRIRSFS GLRGSNSLDN
     IVRFGQDFHS KVGISISSRR GRGSRCVPKA MFERFTEKAI KVIMLAQEEA RRLGHNFVGT
     EQILLGLIGE GTGIAAKVLK SMGINLKDAR VEVEKIIGRG SGFVAVEIPF TPRAKRVLEL
     SLEEARQLGH NYIGSEHLLL GLLREGEGVA ARVLENLGAD PSNIRTQVIR MVGEGNEVSV
     VTGGSGGNTK MPTLEEYGTN LTKLAEEGKL DPVVGRQDQI ERVVQILGRR TKNNPCLIGE
     PGVGKTAIAE GLAQRIASGD VPDTIEGKKV ITLDMGLLVA GTKYRGEFEE SLKNLMQEIK
     QSDEIILFID EVHTLIGAGA AEGAIDAANI LKPALARGEL QCIGATTLDE YRKHIEKDPA
     LERRFQPVKV PEPSVDETIQ ILKGLRERYE IHHKLRYTDE ALVSAAQLSY QYISDRFLPD
     KAIDLIDEAG SRVRLRHAQL PEEAKELEKE LRQITKSKNE AVRSQDFEKA GELRDREIEL
     RAQITAIQEK DKEMNKAEAE AGDGGPVVTE VDIQHIVSSW TGIPVEKVST DESDRLLKME
     ETLHKRVIGQ DEAVIAISRA IRRARVGLKN PNRPIASFIF SGPTGVGKSE LAKALAAYYF
     GSEEAMIRLD MSEFMERHTV SKLIGSPPGY VGYTEGGQLT EAVRRRPYTV VLFDEIEKAH
     PDVFNMMLQI LEDGRLTDSK GRTVDFKNTL LIMTSNVGSS VIEKGGRRIG FDLDYDEKDS
     SYNRIKSLVT EELKQYFRPE FLNRLDEMIV FRQLTKLEVK EIADIMLKEV FDRLKDKEIE
     LQVTERFRER VVEEGYNPSY GARPLRRAIM RLLEDSMAEK MLARDIKEGD SVIVDVDSDG
     NVTVLNGSSG TPESLGDPIS VV
//
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