ID A0A1U8NPJ2_GOSHI Unreviewed; 922 AA.
AC A0A1U8NPJ2;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Chaperone protein ClpC1, chloroplastic-like {ECO:0000313|RefSeq:XP_016739859.1, ECO:0000313|RefSeq:XP_016739860.1};
GN Name=LOC107949637 {ECO:0000313|RefSeq:XP_016739859.1,
GN ECO:0000313|RefSeq:XP_016739860.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016739859.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016739859.1, ECO:0000313|RefSeq:XP_016739860.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016739859.1,
RC ECO:0000313|RefSeq:XP_016739860.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_016739859.1; XM_016884370.1.
DR RefSeq; XP_016739860.1; XM_016884371.1.
DR STRING; 3635.A0A1U8NPJ2; -.
DR PaxDb; 3635-A0A1U8NPJ2; -.
DR GeneID; 107949637; -.
DR KEGG; ghi:107949637; -.
DR OrthoDB; 275944at2759; -.
DR Proteomes; UP000189702; Chromosome 7.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF155; CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 92..234
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 508..543
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT COILED 497..560
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 922 AA; 102237 MW; 66DBF5DAD2F5570B CRC64;
MAKILAQSAI VPTLLTSRSH GASKESGKPK RSAKMMCSLQ TPGLRIRSFS GLRGSNSLDN
IVRFGQDFHS KVGISISSRR GRGSRCVPKA MFERFTEKAI KVIMLAQEEA RRLGHNFVGT
EQILLGLIGE GTGIAAKVLK SMGINLKDAR VEVEKIIGRG SGFVAVEIPF TPRAKRVLEL
SLEEARQLGH NYIGSEHLLL GLLREGEGVA ARVLENLGAD PSNIRTQVIR MVGEGNEVSV
VTGGSGGNTK MPTLEEYGTN LTKLAEEGKL DPVVGRQDQI ERVVQILGRR TKNNPCLIGE
PGVGKTAIAE GLAQRIASGD VPDTIEGKKV ITLDMGLLVA GTKYRGEFEE SLKNLMQEIK
QSDEIILFID EVHTLIGAGA AEGAIDAANI LKPALARGEL QCIGATTLDE YRKHIEKDPA
LERRFQPVKV PEPSVDETIQ ILKGLRERYE IHHKLRYTDE ALVSAAQLSY QYISDRFLPD
KAIDLIDEAG SRVRLRHAQL PEEAKELEKE LRQITKSKNE AVRSQDFEKA GELRDREIEL
RAQITAIQEK DKEMNKAEAE AGDGGPVVTE VDIQHIVSSW TGIPVEKVST DESDRLLKME
ETLHKRVIGQ DEAVIAISRA IRRARVGLKN PNRPIASFIF SGPTGVGKSE LAKALAAYYF
GSEEAMIRLD MSEFMERHTV SKLIGSPPGY VGYTEGGQLT EAVRRRPYTV VLFDEIEKAH
PDVFNMMLQI LEDGRLTDSK GRTVDFKNTL LIMTSNVGSS VIEKGGRRIG FDLDYDEKDS
SYNRIKSLVT EELKQYFRPE FLNRLDEMIV FRQLTKLEVK EIADIMLKEV FDRLKDKEIE
LQVTERFRER VVEEGYNPSY GARPLRRAIM RLLEDSMAEK MLARDIKEGD SVIVDVDSDG
NVTVLNGSSG TPESLGDPIS VV
//