ID A0A1U8P796_GOSHI Unreviewed; 300 AA.
AC A0A1U8P796;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Uncharacterized protein LOC107955806 {ECO:0000313|RefSeq:XP_016747092.1};
GN Name=LOC107955806 {ECO:0000313|RefSeq:XP_016747092.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016747092.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016747092.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016747092.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_016747092.1; XM_016891603.1.
DR AlphaFoldDB; A0A1U8P796; -.
DR STRING; 3635.A0A1U8P796; -.
DR PaxDb; 3635-A0A1U8P796; -.
DR GeneID; 107955806; -.
DR KEGG; ghi:107955806; -.
DR OrthoDB; 1132246at2759; -.
DR Proteomes; UP000189702; Chromosome 9.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR032567; LDOC1-rel.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR001878; Znf_CCHC.
DR PANTHER; PTHR15503; LDOC1 RELATED; 1.
DR PANTHER; PTHR15503:SF43; REVERSE TRANSCRIPTASE RNASE H-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08284; RVP_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 45..59
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 300 AA; 33335 MW; 7BE26CB711668189 CRC64;
MRPKKKAKSD GPMRVGPSVA PTGVAPCGHY SRRHLGDCCR TIGACLRCGS TEHRVRDCPL
RIDQVQALGS GTVQPLKVVQ QPSRGRGQAR GVNALIDIGS AHSYVASTVS ETLGIPIEGT
DSKVTMLSPL GQSIRVSKLY KDVPLEVQRT VFLADLMELL FGEFDLILRM DWLVKHRISL
DCTTKRVILW TEEDSEVMVI GDRRDYLTNV ISALVAEKLV RRGYVFPEEL PGLPPSRGVD
FRIELFPGTS QVSITPYQMA SKELTELKAQ IQELLDRGFI RSSVSSWRAP VLFMKRKMGQ
//
