ID A0A1U8PJI4_GOSHI Unreviewed; 843 AA.
AC A0A1U8PJI4;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Homeobox-leucine zipper protein REVOLUTA-like {ECO:0000313|RefSeq:XP_016750468.1};
GN Name=LOC107959025 {ECO:0000313|RefSeq:XP_016750468.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016750468.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016750468.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016750468.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class III subfamily.
CC {ECO:0000256|ARBA:ARBA00010338}.
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DR RefSeq; XP_016750468.1; XM_016894979.1.
DR AlphaFoldDB; A0A1U8PJI4; -.
DR STRING; 3635.A0A1U8PJI4; -.
DR PaxDb; 3635-A0A1U8PJI4; -.
DR GeneID; 107959025; -.
DR KEGG; ghi:107959025; -.
DR OrthoDB; 454859at2759; -.
DR Proteomes; UP000189702; Chromosome 10.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR CDD; cd14686; bZIP; 1.
DR CDD; cd00086; homeodomain; 1.
DR CDD; cd08875; START_ArGLABRA2_like; 1.
DR Gene3D; 3.30.530.20; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR044830; HD-Zip_III.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR013978; MEKHLA.
DR InterPro; IPR023393; START-like_dom_sf.
DR InterPro; IPR002913; START_lipid-bd_dom.
DR PANTHER; PTHR45950; HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14; 1.
DR PANTHER; PTHR45950:SF10; HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF08670; MEKHLA; 1.
DR Pfam; PF01852; START; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00234; START; 1.
DR SUPFAM; SSF55961; Bet v1-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50848; START; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Differentiation {ECO:0000256|ARBA:ARBA00022782};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702}.
FT DOMAIN 28..84
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 154..382
FT /note="START"
FT /evidence="ECO:0000259|PROSITE:PS50848"
FT DNA_BIND 30..85
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT COILED 94..121
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 843 AA; 92420 MW; 764FE1E360424DAF CRC64;
MAMALAQHRE SSSDSSINKH LDGGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECP
ILSNIEPKQI KVWFQNRRCR EKQKKESSRL QTVNRKLTAM NKLLMEENDR LQKQVSQMVC
ENGYMKQQLH TVNTSAADAN CDSLSTTPQH SLRDTNSPAG LLSIAEETLA EFLSKATGTA
VDWVQMPGMK PGPDSVGIFT ISQSCSGVAA RACGLVSLEP IKIAEILKDR PSWSRDCRNL
EVFTMFPAGN GGTIELVYAQ KFAPTTLAPA RDFWTLRYTT TLENGSLVVC ERSLSGSGAG
PSAAAAAQFV RAEVLPSGYL IRPCEGGGSI IHIVDHLNLE AWSVPEVLRP LYESSKVIAQ
KMTIAALRYI RQIAQETSGE VVYSLGRQPA VLRTFSQRLS RGFNDAINGF NDDGWSIMNC
DGTEDVIIAI NSSKSFSSTS NPANALSFLG GVLCAKASML LQNIAPAVLV RFLREHRSEW
ADFNVDAYCA TSLKAGTNAY PGMRHTRFTG SQIIMPLGHT IEHEELLEVI RLEGHSFVQE
DAFVSRDIHL LQICSGIDEN AVGACSELVF APIDEMFPDD GPLLPSGFRV IPLDSKSSDT
QDSLTTNRTL DLTSSLEVGP ATNHAAGDTS SCRNTRSVLT IAFQFPFESN LRDNVATMAR
QYVRSVISSV QRVAMAISPS GLNPAVGSKL SPGSPETLTL AHWICRSYSY HLGAELLRSE
SLGGDSILKN LWQHQDAILC CSLKSQPVFI FANQAGLDML ETTLVALQDI TLDKLFDESG
RKALCSDFGK LMQQGYACLP AGICISTMGR HVSYEQAFAW KVLEADESTV HCLAFSFVNW
SFV
//
