ID A0A1U8PSJ6_GOSHI Unreviewed; 972 AA.
AC A0A1U8PSJ6;
DT 10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Chaperone protein ClpB4, mitochondrial-like isoform X1 {ECO:0000313|RefSeq:XP_016753249.1};
GN Name=LOC107961684 {ECO:0000313|RefSeq:XP_016753249.1};
OS Gossypium hirsutum (Upland cotton) (Gossypium mexicanum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=3635 {ECO:0000313|Proteomes:UP000189702, ECO:0000313|RefSeq:XP_016753249.1};
RN [1] {ECO:0000313|Proteomes:UP000189702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. TM-1 {ECO:0000313|Proteomes:UP000189702};
RX PubMed=25893780; DOI=10.1038/nbt.3208;
RA Li F., Fan G., Lu C., Xiao G., Zou C., Kohel R.J., Ma Z., Shang H., Ma X.,
RA Wu J., Liang X., Huang G., Percy R.G., Liu K., Yang W., Chen W., Du X.,
RA Shi C., Yuan Y., Ye W., Liu X., Zhang X., Liu W., Wei H., Wei S., Huang G.,
RA Zhang X., Zhu S., Zhang H., Sun F., Wang X., Liang J., Wang J., He Q.,
RA Huang L., Wang J., Cui J., Song G., Wang K., Xu X., Yu J.Z., Zhu Y., Yu S.;
RT "Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1)
RT provides insights into genome evolution.";
RL Nat. Biotechnol. 33:524-530(2015).
RN [2] {ECO:0000313|RefSeq:XP_016753249.1}
RP IDENTIFICATION.
RC TISSUE=Leaf {ECO:0000313|RefSeq:XP_016753249.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR RefSeq; XP_016753249.1; XM_016897760.1.
DR AlphaFoldDB; A0A1U8PSJ6; -.
DR STRING; 3635.A0A1U8PSJ6; -.
DR PaxDb; 3635-A0A1U8PSJ6; -.
DR GeneID; 107961684; -.
DR KEGG; ghi:107961684; -.
DR OrthoDB; 35211at2759; -.
DR Proteomes; UP000189702; Chromosome 11.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF86; CHAPERONE PROTEIN CLPB4, MITOCHONDRIAL; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000189702};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 83..227
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 103..130
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 493..614
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 972 AA; 109043 MW; DA4A0BFECEEE7AD4 CRC64;
MASRRLTRSA FLAIKASKAS TRYLFRARAI SAAACTLRNS LISPHRSQNF NEVAENNGGF
FSLTRSYHSS PPLYSSATSP AQINQSDYTD MAWEGLVGAV QAAKDSKQQM VEAEHLMKAL
LEQKDGLARR IFTKAGLDNT SVLQATDDFI SKQPKVMDTS NSIMGSNLSS LLDNSRKHKK
EMGDNFVSVE HFVLAFTSDK RFGQQLFKNL QLSEHALKDA IKAVRGNQRV TDQNPEGKYE
ALEKYGNDLT ELAKRGKLDP VIGRDDEIRR CIQILSRRTK NNPVIIGEPG VGKTAIAEGL
AQRIVRGDVP EPLLNRKLIS LDMGSLLAGA KFRGDFEERL KAVLKEVTAS NGKIILFIDE
IHTVVGAGAT GGAMDAGNLL KPMLGRGELR CIGATTLDEY RKYIEKDPAL ERRFQQVFCG
QPSVEDTVSI LRGLRERYEL HHGVKISDSA LVSAAVLADR YITERFLPDK AIDLVDEAAA
KLKMEITSKP TELDEIDRAV LKLEMEKLSL KNDTDKASKE RLSKLENDLN SLKQKQKELT
EQWDHEKALI TRIRSVKEEI DRVNQEMEAA EREYDLSRAA ELKYGTLMSL QRQLEEAEKN
LAEFQKSGKS LLREEVTDLD IAEIVSKWTG IPLSNLQQSE RDKLVLLEKE LHKRVIGQDI
AVKSVADAIR RSRAGLSDPN RPIASFMFMG PTGVGKTELA KALAGFLFNT ENALVRIDMS
EYMEKHAVSR LVGAPPGYVG YEEGGQLTEV VRRRPYSVVL FDEIEKAHHD VFNILLQLLD
DGRITDSQGR TVSFTNCVVI MTSNIGSHYI LETLQSTYDS KDAVYNVMKK QVVELARQTF
RPEFMNRIDE YIVFQPLDSK EISKIVELQM VRLKDRLRQK KIYLHYTKEA VELLGTLGFD
PNFGARPVKR VIQQLVENEV AMGVMRGDFK EEDSIIVDVE SLPSVKDLPP QDKLCIKKLE
SSSPLDVMVA ND
//