ID   A0A1U8QAS4_NELNU        Unreviewed;      1374 AA.
AC   A0A1U8QAS4;
DT   10-MAY-2017, integrated into UniProtKB/TrEMBL.
DT   10-MAY-2017, sequence version 1.
DT   27-MAR-2024, entry version 27.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
GN   Name=LOC104612685 {ECO:0000313|RefSeq:XP_019055894.1};
OS   Nelumbo nucifera (Sacred lotus).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo.
OX   NCBI_TaxID=4432 {ECO:0000313|Proteomes:UP000189703, ECO:0000313|RefSeq:XP_019055894.1};
RN   [1] {ECO:0000313|RefSeq:XP_019055894.1}
RP   IDENTIFICATION.
RG   RefSeq;
RL   Submitted (NOV-2023) to UniProtKB.
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DR   RefSeq; XP_019055894.1; XM_019200349.1.
DR   GeneID; 104612685; -.
DR   OrthoDB; 451894at2759; -.
DR   Proteomes; UP000189703; Unplaced.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 2.40.40.20; -; 1.
DR   Gene3D; 3.10.450.40; -; 1.
DR   Gene3D; 3.30.1490.180; RNA polymerase ii; 1.
DR   Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR19376:SF36; DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 1; 1.
DR   Pfam; PF11523; DUF3223; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   4: Predicted;
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW   ECO:0000313|RefSeq:XP_019055894.1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Reference proteome {ECO:0000313|Proteomes:UP000189703};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          113..397
FT                   /note="RNA polymerase N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00663"
SQ   SEQUENCE   1374 AA;  154698 MW;  1640DC3B6A07CEA6 CRC64;
     MDSHQYKDCK YCAQGSSKEW YPTMKFKVAS KDLSKKNTSS VIVEVNEKLP KKFANKNLGE
     VLPTDYWDCI QKDPEQEESF LKPNRRSLSP FQVYCLLKSV DLRFLKKFVL RPEAIFLSCF
     PVTPNCHRIM ELTHLSSNGH QLAFDERTKA MKKLIDSKRH ANELSLHVRN CLSVSKLHTD
     KSLKKDTVLG KNDSVSSMCG LKWIKEIMLG KRTDYAFRMT VIGDPKISLC EIGVPRMVAE
     NLQIPEYLNV HNWEKLINHL KFHLIEKGRF FIRRKGKLVQ LCDTSELKLG DIVYRHLDDG
     DIVLINRPPS VHQHSLMALS VKVLPINSVV SINPLCCSPL SGDFDGDCLH GFIAQAIDCR
     VELRELVALS KQLVNGQNGQ NLLSLSHDSL SAAHLVTQNG VFLDMFQMQQ LKMLCPHQLQ
     IPVILKAPLL EAPLWTGKQL FDMLLPQSFD YVFPSSGVKI SNGELLCSFG ESSWLRSRAG
     SIFSVLVDHY QNRAIDFLFA AQDVFCEWIS MGGFSVSLSD IYIASDSHSR KNMLDEVRCG
     LQEIKKKIYI KQLMVDPEMV HLLRYDGENT KTNGYRVDQE CPSNQESVVL CQVSVSSFRE
     AFHDIQSLIH QYASNDNSLL AMLKAGSKGN LLKIVQQGLC LGLQHASVPL SFQIPCKLSC
     ASWNYQKSHD IPACSISNIP YAVVENSFLD GLNPLECFVH SVSTRDNSFG ENADLPGTLT
     RKLMFYMRDL YIAYDGTVRT AYGNQLVQFS YGCFKGDSVQ DPCGLFGGSP NAYDGVGGQP
     VGSLSACSIS EAAYSALDQP ISKLEISPLL NLKKVLECGQ KNASADQTAS LFLSKKLGRW
     ICGFEYGATE VKNHLERVFF SDVVSTVMVI FSPQRHSQMS ASPWVCHFHV CKEMMERRGL
     NIQSIIDALQ RNSTGEQAKI NLRNILNELR KKYKLSGKQV KIKLPNLMIL SRDCTFIDQR
     ENGRTFCIVV IVEITKDSSK QLDTVRDLVV PFLSRTVIKG FLEFKSVDIL WNDLPQSSKS
     HMFSSGELYL KVFMSEDCER TKFWSSLQNA CLPVMDLIDW ERSYPDNIYN IVCAYGIDAG
     WKYFLRSLKF ALSDIGKTVL LEHLLLVANS LSFTGEFLGL SAKGIKRQMD QASVSSPFMQ
     ACFSNPGACF IKAAKEGAVD DLQGILDSVS WGKKVPIGTG GHFDILYSGK GFTPAKPTNI
     YSALCHESKS HGENVETGLT DACRKVCCKW EKQSFYASKD PLPKGDSSEN LPSSVLRSIY
     SREDVLKLNS SLKHILHKYP INDYLSEVDK SILLRALYFH PKRNQKMGTG PKDIKVLPRI
     RVGYHSEHQQ SRCFMLVRTD GTIEDFSYRK CILGALEKIC PQIASRFQLK GWQS
//