ID A0A1V4J3C9_PATFA Unreviewed; 944 AA.
AC A0A1V4J3C9;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=HMG box transcription factor BBX isoform A {ECO:0000313|EMBL:OPJ66722.1};
GN Name=BBX {ECO:0000313|EMBL:OPJ66722.1};
GN ORFNames=AV530_016727 {ECO:0000313|EMBL:OPJ66722.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ66722.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ66722.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ66722.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ66722.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ66722.1}.
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DR EMBL; LSYS01009367; OPJ66722.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4J3C9; -.
DR STRING; 372326.A0A1V4J3C9; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd21989; HMG-box_HBP2; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR049523; BBX_HMG-box.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR InterPro; IPR019102; TF_HMG_box_BBX_DUF2028.
DR PANTHER; PTHR13059:SF10; HMG BOX TRANSCRIPTION FACTOR BBX; 1.
DR PANTHER; PTHR13059; HMG-BOX TRANSCRIPTION FACTOR BBX; 1.
DR Pfam; PF09667; DUF2028; 2.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Reference proteome {ECO:0000313|Proteomes:UP000190648};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 187..255
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 187..255
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 110..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 147..187
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 431..536
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 548..646
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 686..727
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 756..788
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 810..892
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 914..944
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..129
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 147..161
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 431..457
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 512..532
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 699..722
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 860..876
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 923..937
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 944 AA; 104461 MW; 65DEF3EBB3826E69 CRC64;
MDSGCQRCGR RGSALPSAPE AGGQRPRYLP RSATAGSSNT VESSATIFVR AGGPRGFNRV
RGGFATFSGG GPRLKVFFWR SLSHDKGFET ASSSSVCNFQ LPSWVTVMKG SSRNKDHSTE
GEGTGKRPKR KCLQWHPLLA KKLLDFSEEE EEEEEEEDID KVPLLGADGL EQDADETEDD
ESSEQRARRP MNAFLLFCKR HRSLVRKEHP RLDNRGATKI LADWWAVLDP KEKQKYTDMA
KEYKDAFMKA NPGYKWCPTT NKPVKTQSST VTNRKKLWAF ASDSAKDLPS PRRVTKSEEM
PQLNFAMADP TQMGGLSMLL LAGEHALTAQ EVSSSTCQSD ATNSMETCQK SSLFQFAEIS
SSTSHSGSSD LTKQCGTSAL FQLAEMCLAS EGVKVKEPGK TKVEAPQDVG EEAPEEMEVE
ELEKRIIKDS CKGQVEQSEK MQNWDETKAE ESEPTKCRDF TSLAMGNSPF ERNDSTKDHM
CCSPELSMGD MNILGLKPEK IKKKKKKNKL DRHTNEKSTP KKPCKKRQSS ESDIESVMYT
IEAVAKGDWG AERLLETPRK KTRPVSNVKG SVLDTKSPKK KVKSKEKKTS KEKPAETTKE
SKPPDFLSIA ASKEVPCEAS DNIKVEPLTP TEEVVPQSLP EQVKTEDSDC VKKIETCGSR
KSERSCKGAL YKTLVSEGML TSLRANVDRG KRSSGKGNSS DHEGCWNEEN WAFSQSGTSG
NKKLKRTKPK EEFGFGLAKL EEEFEKKFNS LPQYSPITFD RKNSAVPRKK RKVGSGSSEQ
PKYNKAIFSE DRISSESAWK NKISISALNT PEPAMMHEPL VGSQKRKARK TKITHLVRTA
DGRVSPAGGT LEEKPKELPQ STLQKTSSAE TDCNSECSRN AETEESHSIT SDMPAVSAFF
SLAALAEVAA MENVHRSQRA TPLPHDGQPN EMSQAPVLIS CADQ
//
