ID A0A1V4J414_PATFA Unreviewed; 604 AA.
AC A0A1V4J414;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE SubName: Full=SLIT and NTRK-like protein 1 isoform B {ECO:0000313|EMBL:OPJ66961.1};
GN Name=SLITRK1 {ECO:0000313|EMBL:OPJ66961.1};
GN ORFNames=AV530_016911 {ECO:0000313|EMBL:OPJ66961.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ66961.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ66961.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ66961.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ66961.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SLITRK family.
CC {ECO:0000256|ARBA:ARBA00010439}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ66961.1}.
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DR EMBL; LSYS01009367; OPJ66961.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4J414; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007409; P:axonogenesis; IEA:InterPro.
DR GO; GO:1905606; P:regulation of presynapse assembly; IEA:InterPro.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR043326; Slitrk.
DR PANTHER; PTHR45773:SF7; SLIT AND NTRK-LIKE PROTEIN 1; 1.
DR PANTHER; PTHR45773; SLIT AND NTRK-LIKE PROTEIN 4-RELATED; 1.
DR Pfam; PF13855; LRR_8; 3.
DR SMART; SM00369; LRR_TYP; 8.
DR SMART; SM00082; LRRCT; 2.
DR SUPFAM; SSF52058; L domain-like; 2.
DR PROSITE; PS51450; LRR; 2.
PE 3: Inferred from homology;
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 527..551
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 124..174
FT /note="LRRCT"
FT /evidence="ECO:0000259|SMART:SM00082"
FT DOMAIN 439..489
FT /note="LRRCT"
FT /evidence="ECO:0000259|SMART:SM00082"
FT REGION 177..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 604 AA; 67649 MW; 0D15C2BD8B27AE72 CRC64;
MENNGLHEIV PGAFLGLQLV KRLHINNNKI KSFRKQTFLG LDDLEYLQAD FNLLRDIDPG
AFRDLNKLEV LILNDNLIST LPPNVFQYVP ITHLDLRGNR LKTLPYEEVL EQIPGIAEIL
LEDNPWDCTC DLLSLKEWLE NIPKNALIGR VICEAPTRLQ GKDLNETTEQ ELCKKNRVDS
SLAAPPAEEE TCDPGPIPTP FKIHGKEDPA TPGSGPNGGT KIPVNWQIKT RPTAAVSTVS
AKSKLQATVS CPQICSCDQI PGSGLKVNCN DRNVSSLVDL KPKPSNVQEL FLRDNKIHTI
RKSHFLDYRK LNLLDLGNNN IATVENNTFK NLFDLRWLYM DSNYLDTLSR EKFAGLQNLE
YLNVEFNGIQ LIMPGTFNAM PKLRVLILNN NLLRSLPVDV FAGVSLSKLS IHNNYFMYLP
VAGVLDQLTS ITQIDLHGNP WDCTCPIVPF KQWAEMLRPK VIMSDLRCES PEDFFKEDFE
SLSNDVICPQ LKILPTLTST NKNSTGLTET GTHSNSYLET SRVSISVLVP GLLLVFVTSA
FTVVGMLVFI LRNRKRSKRR DANSSASEIN SLQTVCDSSY WHNGPYTADG AHRVYDCGSH
SLSD
//
