ID A0A1V4JB78_PATFA Unreviewed; 1399 AA.
AC A0A1V4JB78;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=Condensin complex subunit 1 {ECO:0000256|PIRNR:PIRNR017127};
GN Name=NCAPD2 {ECO:0000313|EMBL:OPJ69340.1};
GN ORFNames=AV530_012418 {ECO:0000313|EMBL:OPJ69340.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ69340.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ69340.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ69340.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ69340.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Regulatory subunit of the condensin complex, a complex
CC required for conversion of interphase chromatin into mitotic-like
CC condense chromosomes. The condensin complex probably introduces
CC positive supercoils into relaxed DNA in the presence of type I
CC topoisomerases and converts nicked DNA into positive knotted forms in
CC the presence of type II topoisomerases.
CC {ECO:0000256|PIRNR:PIRNR017127}.
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CND1 (condensin subunit 1) family.
CC {ECO:0000256|ARBA:ARBA00009606, ECO:0000256|PIRNR:PIRNR017127}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ69340.1}.
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DR EMBL; LSYS01008075; OPJ69340.1; -; Genomic_DNA.
DR STRING; 372326.A0A1V4JB78; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007076; P:mitotic chromosome condensation; IEA:InterPro.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR026971; CND1/NCAPD3.
DR InterPro; IPR032682; Cnd1_C.
DR InterPro; IPR007673; Condensin_cplx_su1.
DR InterPro; IPR024324; Condensin_cplx_su1_N.
DR PANTHER; PTHR14222; CONDENSIN; 1.
DR PANTHER; PTHR14222:SF2; CONDENSIN COMPLEX SUBUNIT 1; 1.
DR Pfam; PF12717; Cnd1; 1.
DR Pfam; PF12922; Cnd1_N; 1.
DR PIRSF; PIRSF017127; Condensin_D2; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306, ECO:0000256|PIRNR:PIRNR017127};
KW Cell division {ECO:0000256|ARBA:ARBA00022618,
KW ECO:0000256|PIRNR:PIRNR017127}; Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW DNA condensation {ECO:0000256|ARBA:ARBA00023067,
KW ECO:0000256|PIRNR:PIRNR017127};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776, ECO:0000256|PIRNR:PIRNR017127};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648}.
FT DOMAIN 77..239
FT /note="Condensin complex subunit 1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF12922"
FT DOMAIN 1069..1228
FT /note="Condensin complex subunit 1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF12717"
FT REGION 949..975
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1290..1399
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1291..1335
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1384..1399
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1399 AA; 155594 MW; EFFF793CCFF31FDA CRC64;
MAAAAWEFHL PLVPTDLLRD SGPGRYVVQD ILPARELPPA LTAFRAAFRA QGALAVLQHF
DPVYSLLHHF QAVGIAVKED TLELMMQVAS HHSNELPAIL GDSGLSHADR TAHLNTLKMN
CYLLAGLVDA FEMETCRNGL LEVDPGGKNK KNRTKTSGSV WEEEREPLLR LLMQLLQLDL
RQLWGGLVVE EEFVSLVTGS CYRILENPSI GLQKYRATRE TVTRLLAMAL NHYDHQFNAT
LKITQMLQHF EHVASVFAQA VSLWATEYGL KSLVGELLRE IGQKCPEDSA REVSGMKGYA
IFISELAEQI PALMLSNISV LLCHLDGENY MMRNAILAAM AEVLVQVLNG DQLEEAARGT
RDQFLNILQA HVCDINGFVR SRVLQLFTRI VQCKALPLTQ FQSVVSLAVG RLKDKSVVVV
KNAIQLLAAF LSNNPFSCKL SCTDLAEPLK KEVQKLQEMR NHSRSASAPA IAPEEEWEAM
LPEVRAATQQ LFQPLQEEEE EVLEVEETVE STLKQITGLL RKLNYKSAAR LTQKALCRFQ
GKEPFSGLTE ENEEATILGV LKRLYTGSCP GENSEDSPHI NSNPKTADIV PEEQPQTELI
KQEMLVQYLQ DAYNFSVKIT EALSLISKMM YENCVLVVQE AIEFFVTVSQ FGMPQALLGV
RRMLPLIWSK EPGIKEAVLN AYRRLYLSTS GDSERARAQN LVDSVSLIMV DASLGTIQCL
EEILSEFVQA DEIKPAVIQL LWERFTEKSQ CSELERRAAV MLLGMMARGK PEIIGSNLDV
LVTVGLSDKV CEDYCLAQEV CNAISKLAGN PKPALGKNSA PFRLPQDHML FGCLREAVSK
GFAQPDGHWI PFMEAAIKLI YHLAEGAEEI CAHILQVCAQ QALEKLQEAD GPENTDPGVS
PSRVSGASSL PTFLLMHLVS LVGQVALQHV AYLEVSVSAE LRRRRLLREQ EKNKKHPNSS
AKKQRPQSTG NETTMEEELG LVGASADDTE AELIRSICET ELLDGKHLFS AVVPLVLKIC
NNPGLYSDSA LSAAAALALG KVCMISSEFC DSHLRLLFTM MEKSTLPAVR SNLIIAAGDL
AIRFPNLLEP WTSHLYARLR DPCPSARQTA ALVMTHLILK DMVKVKGQVS EMAALLIDPE
EAVMGVAQNF FSELSKKGNA IYNLLPDIIS RLSDPDCGIE EESFHAIMRH LFSYITKDKQ
TESLVEKLCQ RFRTARTERQ YRDLSHCLTL LPLSERGLHK LQDNFDCFAD KLQDPAVYSC
FQTVLARFRR AGSKPETKVL AEELEQKLSA SRNRGLDSAE TCQEGSQSPV PESAKQKPTG
SSRRQPLSTA NRDEDFVTPQ PRALRNHKRT QKRPPPKKAV IVFSSDEENS SEDELLGKLE
EETPTKTTPI TRSSVSRLR
//
