ID A0A1V4JFS3_PATFA Unreviewed; 611 AA.
AC A0A1V4JFS3;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=RNA-binding protein 47 {ECO:0000256|ARBA:ARBA00015191};
DE AltName: Full=RNA-binding motif protein 47 {ECO:0000256|ARBA:ARBA00030579};
GN Name=RBM47 {ECO:0000313|EMBL:OPJ71048.1};
GN ORFNames=AV530_017354 {ECO:0000313|EMBL:OPJ71048.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ71048.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ71048.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ71048.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ71048.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the RRM RBM47 family.
CC {ECO:0000256|ARBA:ARBA00005319}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ71048.1}.
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DR EMBL; LSYS01007721; OPJ71048.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4JFS3; -.
DR STRING; 372326.A0A1V4JFS3; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR CDD; cd12485; RRM1_RBM47; 1.
DR CDD; cd12491; RRM2_RBM47; 1.
DR CDD; cd12497; RRM3_RBM47; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR006535; HnRNP_R/Q_splicing_fac.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR047044; RBM47_RRM1.
DR InterPro; IPR034440; RBM47_RRM2.
DR InterPro; IPR034445; RBM47_RRM3.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01648; hnRNP-R-Q; 1.
DR PANTHER; PTHR21245; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; 1.
DR PANTHER; PTHR21245:SF6; RNA-BINDING PROTEIN 47; 1.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 3.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 91..164
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 171..253
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 266..338
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
SQ SEQUENCE 611 AA; 66542 MW; 546004A55DE7B74B CRC64;
MVLGAEAGSS FYQAVNEFGT MTAEDSTARM SNDSSNVATT KVPEGVAGAP NEAALLALME
RTGYSMIQEN GQRKYGGPPP GWEGLHPPRG CEVFVGKIPR DVYEDELVPV FESVGRIYEM
RLMMDFDGKN RGYAFVMYTQ KHEAKRAVRE LNNYEIRPGR LLGVCCSVDN CRLFIGGIPK
MKKREEILEE IAKVTEGVLD VIVYASAADK MKNRGFAFVE YESHRAAAMA RRKLMPGRIQ
LWGHQIAVDW AEPEIDVDED VMETVKILYV RNLMIETTED TIKKVFGQFN PGCVERVKKI
RDYAFVHFTT REDAIHAMNN LNGVELEGSC LEVTLAKPVD KEQYTRYQKA AKGGATATPE
VTQQPNYVYS CDPYTLAYYG YPYNALIGPN RDYFVKAGSI RGRGRGAAGN RAPGPRGSYL
GGYSAGRGIY SRYHEGKGKQ QEKGYELVPN LELPAVNPVA IKPGAVAIPA IGAQYSMFQA
APPAKMMEDG KIHTVEHIIN PIAIQQDPAS AAAAAAAAAA AIIPAVSTPP PFQGRPITPV
YTMAPNVQRI PAAGIYGTSY VPFAAPAAAT ATIATLQKNA AAAYGGYAGY IPPAFPAATI
QVPIHDIYQT Y
//
