ID A0A1V4JKF0_PATFA Unreviewed; 816 AA.
AC A0A1V4JKF0;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Heterogeneous nuclear ribonucleoprotein U {ECO:0000313|EMBL:OPJ72659.1};
GN Name=HNRNPU {ECO:0000313|EMBL:OPJ72659.1};
GN ORFNames=AV530_005197 {ECO:0000313|EMBL:OPJ72659.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ72659.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ72659.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ72659.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ72659.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ72659.1}.
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DR EMBL; LSYS01006902; OPJ72659.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4JKF0; -.
DR STRING; 372326.A0A1V4JKF0; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR CDD; cd12884; SPRY_hnRNP; 1.
DR Gene3D; 2.60.120.920; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR InterPro; IPR001870; B30.2/SPRY.
DR InterPro; IPR043136; B30.2/SPRY_sf.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR InterPro; IPR003877; SPRY_dom.
DR InterPro; IPR035778; SPRY_hnRNP_U.
DR PANTHER; PTHR12381:SF11; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U; 1.
DR PANTHER; PTHR12381; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER; 1.
DR Pfam; PF13671; AAA_33; 1.
DR Pfam; PF02037; SAP; 1.
DR Pfam; PF00622; SPRY; 1.
DR SMART; SM00513; SAP; 1.
DR SMART; SM00449; SPRY; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR PROSITE; PS50188; B302_SPRY; 1.
DR PROSITE; PS50800; SAP; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Methylation {ECO:0000256|ARBA:ARBA00022481};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648};
KW Ribonucleoprotein {ECO:0000313|EMBL:OPJ72659.1}.
FT DOMAIN 8..42
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT DOMAIN 280..476
FT /note="B30.2/SPRY"
FT /evidence="ECO:0000259|PROSITE:PS50188"
FT REGION 46..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 664..691
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 90..109
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..163
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..289
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 816 AA; 88421 MW; 029C9566087C76DF CRC64;
MSCSPVNVKK LKVSELKEEL KKRRLSDKGL KAELMERLQA ALDMEEAGGG GLASSAVEPG
NGSMEGEAAE SGGGASQLHQ GGGPDQAAAS TAEDDDEEGL EAADGDAMEL GEENGERAGA
GGGPMEEEAG GEEEEEEEEE EDENGDDQGF QEGEDELADE EEAAAGDANG HGDQQPPQPQ
PQQPPPLIQP RGAAKEAPGK SPGGASGPPA AAPSGPAGPA KQQQQQKKAE GGGGRPGAQA
SGGEAKTEQK PGEKKRGVKR PREDHGRGYF EYIEENKYSR AKSPQPPVEE EDEHFDDTVV
CLDTYNCDLH FKISRDRFSA SSLTMESFAF LWAGGRASYG VSKGKVCFEM KVTEKIPVKH
LYTKDIDIHE VRVGWSLNTS GMLLGEEEFS YGYSLKGIKT CNCETEDFGE KFDENDVIGC
FANFDGDEVE LSYSKNGQEL GVAFKISKEV LDGRPLFPHV LCHNCAVEFN FGQKEEPYFP
VPEEYTFIQK VPLEDRVRGP KGPEQKKDCE VVMMIGLPGA GKTTWVTKHA AANPGKYNIL
GTNTIMDKMM VAGFKRQMAD TGKLNTLLQR APQCLGKFIE IAARKKRNFI LDQTNVSAAA
QRRKMCLFAG FQRKAVVVCP KDEDYKQRTQ KKAEVEGKDL PEHAVLKMKG NFTLPEVAEC
FDEIIYVELQ KEEAQKLLEQ YKEERVREVV EDLTCEATSE EESLAIVVDT TGGEATCPSE
VVEVVVVVAA AAVPLATHIL VALSFQAEVA TQTEETITEV ECPTGGTTTR TSEEGEIIVA
TKTNLRATTS GSRVNSGVRS HGVSIITKDI IEYPNK
//
