ID A0A1V4JL70_PATFA Unreviewed; 1808 AA.
AC A0A1V4JL70;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=AT-rich interactive domain-containing protein 1B isoform C {ECO:0000313|EMBL:OPJ72942.1};
GN Name=ARID1B {ECO:0000313|EMBL:OPJ72942.1};
GN ORFNames=AV530_005402 {ECO:0000313|EMBL:OPJ72942.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ72942.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ72942.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ72942.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ72942.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ72942.1}.
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DR EMBL; LSYS01006902; OPJ72942.1; -; Genomic_DNA.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0035060; C:brahma complex; IEA:InterPro.
DR GO; GO:0016514; C:SWI/SNF complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR CDD; cd16877; ARID_ARID1B; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR038040; ARID_ARID1B.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR021906; BAF250/Osa.
DR InterPro; IPR033388; BAF250_C.
DR PANTHER; PTHR12656:SF11; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1B; 1.
DR PANTHER; PTHR12656; BRG-1 ASSOCIATED FACTOR 250 BAF250; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF12031; BAF250_C; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS51011; ARID; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648}.
FT DOMAIN 628..719
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT REGION 16..89
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 104..397
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 458..624
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 722..829
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 875..927
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 970..1140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1153..1181
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1394..1466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 24..41
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 57..71
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 104..161
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 197..233
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 249..267
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 277..326
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..397
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 461..521
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 536..550
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 551..566
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 576..620
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 734..769
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 808..824
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 875..893
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1010..1036
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1069..1099
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1106..1138
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1153..1169
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1414..1432
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1447..1464
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1808 AA; 196657 MW; F16C3935CA13517B CRC64;
MGKDMGAQYG AANPAWAAAQ QRNHPAMSPG NTGQAISRTQ GSPMDPMVMK RPQLYGLGNN
PHSQAQPSSP YPGQPYGHPG PQRYPLGMQG RAPAMAGMQY PQQQIPPQYG QQGVSGYCQQ
GQQPYYNQQP QHLPPQAQYL SQAQQRYQTQ QDMSQEGYGT RSQAPMAPGK PNHEDLNLIQ
QERPSSLPDL SGSIDDLPTG TEATLSSAVS ASGSTSSQGE QSNPAQSPFS PHASPHLSGI
PGGPSPSPVG SPVGSNQSRS GPISPASIPS SQMPPQPPGS QSESSSHPAL SQSPMPQDRG
FMTGIQRNPQ MSQYGPQQTG PSMSPHPSPG GQVHPGIGSF QQSNSSGTYG PQMSQYGPQG
NYSRPPTYSG VPNTSYSGPG PGMGINANSQ MHGQGPSQPC GTMPLGRMPS AGMQSRPFPG
NMSSMTPNSP GMSQQGGPGM GPPMPTVNRK AQEAAAAVMQ AAANSAQSRQ GNFPAMNQSG
IMGSSSPYTQ PMNNSSGLMN PQAPPYSMAP NMVNSSTAPM GLADMMTPGE SKLPLPLKAD
GKEEGPPQPE SKSKDSYSSQ GISQPPTPGN LPVPSPMSPS SASISSFHGD ESDSISSPGW
PKTPSSPKSS SSTTTGEKIT KVYELGNEPE RKMWVDRYLT FMEERGTPVA SLPAVGKKPL
DLFRLYVCVK EIGGLAQVNK NKKWRELATT LNVGTSSSAA SSLKKQYIQY LFAFECKIER
GEEPPPEVFS TGDTKKQPKI QPPSPANSGS LQGPQTPQST GSNSMTEVPG DLKPPTPAST
PHGQMTPMQG GRNSAVSVHD PFSDVSDSAF PKRNSVTPSA PYQQGINMPD MMGRMPYEPN
KDPFGGMRKV PGSNEPFMTP GQMPNSGIQD MYNQSPSGAM SNMSMSQRQQ FSYGGYDRRH
EPYGQQYPGQ GPPSGQPPYG GHQPGMYPQQ QNYKRHMDGM YGPPAKRHEG DMYNMQYGNQ
QQEMYNQYSN AYTGPDRRPM QGQYPYPYNR ERMQGPGQMQ QHGIPPQMIG GPMQSSSSSE
GPQQNMWPTR NDMPYAYQNR QGPGGPAQAP PYPGMNRTDD MMVPDQRINH ESQWPSHVNQ
RQPSYMSSSA SMQPITRPPQ SSYQTPPSMP NHISRAPSPA SFQRSLENRM SPSKSPFLPS
MKMQKVLPTV PVSQVTGPPP QPPPIRREIT FPPGSVEASQ PVLKPRRKIT SKDIVTPEAW
RVMMSLKSGL LAESTWALDT INILLYDDST VATFNLSQLS GFLELLVEYF RKCLIDIFGI
LMEYEVGDPG HKALDHKAAK KDDSQSLAEV TGKEESDECI DYFDEDEEEG EDEKVEGEEK
SIVFSTPGAI ADPSERPKQA SKFDKLPIKI VKKNNLFVVD RSDKLGRVQE FDSGLLHWQL
GGGDTTEHIQ THFESKMEIP PRRKAPPPLN SPSKKKDLEG KGESEEQQEK SITATIDDVL
SARPGALPED SNSSSQTESS KFPFGIHQAK SHRNIKLLED EPRSRDETPL CTITHWQDSL
AKRCICVSNI VRSLSFVPGN DTEMSKHPGL VLILGKLILL HHEHPERKRA PQTYEKEEEE
DKGVACSKDE WWWDCLEVLR DNTLVTLANI SGQLDLSAYT ESICLPILDG LLHWMVCPSA
EAQDPFPTVG PNSVLSPQRL VLETLCKLSI QDNNVDLILA TPPFSRQEKL YATLVRYVGD
RKNPVCREMS MALLSNLAQG DTLAARAIAV QKGSIGNLIS FLEDGVTMAQ YQQSQHNLMH
MQPPPLEPPS VDMMCRAAKA LLAMARVDEN RSEFLLHEGR LLDISISAVL NSLVASVICD
VLFQIGQL
//
