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Database: UniProt
Entry: A0A1V4JLX9_PATFA
LinkDB: A0A1V4JLX9_PATFA
Original site: A0A1V4JLX9_PATFA 
ID   A0A1V4JLX9_PATFA        Unreviewed;      3158 AA.
AC   A0A1V4JLX9;
DT   07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT   07-JUN-2017, sequence version 1.
DT   05-JUN-2019, entry version 11.
DE   SubName: Full=DNA polymerase zeta catalytic subunit isoform B {ECO:0000313|EMBL:OPJ73179.1};
GN   Name=REV3L {ECO:0000313|EMBL:OPJ73179.1};
GN   ORFNames=AV530_005579 {ECO:0000313|EMBL:OPJ73179.1};
OS   Patagioenas fasciata monilis.
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae;
OC   Patagioenas.
OX   NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ73179.1, ECO:0000313|Proteomes:UP000190648};
RN   [1] {ECO:0000313|EMBL:OPJ73179.1, ECO:0000313|Proteomes:UP000190648}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ73179.1};
RC   TISSUE=Blood {ECO:0000313|EMBL:OPJ73179.1};
RA   Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA   Shapiro B.;
RT   "Band-tailed pigeon sequencing and assembly.";
RL   Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:OPJ73179.1}.
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DR   EMBL; LSYS01006902; OPJ73179.1; -; Genomic_DNA.
DR   Proteomes; UP000190648; Unassembled WGS sequence.
DR   GO; GO:0016035; C:zeta DNA polymerase complex; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0019985; P:translesion synthesis; IEA:InterPro.
DR   Gene3D; 1.10.132.60; -; 1.
DR   Gene3D; 3.30.420.10; -; 1.
DR   Gene3D; 3.90.1600.10; -; 1.
DR   InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR   InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR   InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR   InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR   InterPro; IPR042087; DNA_pol_B_C.
DR   InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR   InterPro; IPR032757; DUF4683.
DR   InterPro; IPR030559; PolZ_Rev3.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR025687; Znf-C4pol.
DR   PANTHER; PTHR45812; PTHR45812; 2.
DR   Pfam; PF00136; DNA_pol_B; 1.
DR   Pfam; PF03104; DNA_pol_B_exo1; 2.
DR   Pfam; PF15735; DUF4683; 1.
DR   Pfam; PF14260; zf-C4pol; 1.
DR   PRINTS; PR00106; DNAPOLB.
DR   SMART; SM00486; POLBc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000190648};
KW   Reference proteome {ECO:0000313|Proteomes:UP000190648}.
FT   DOMAIN       34    177       DNA_pol_B_exo1. {ECO:0000259|Pfam:
FT                                PF03104}.
FT   DOMAIN      737   1126       DUF4683. {ECO:0000259|Pfam:PF15735}.
FT   DOMAIN     2154   2512       DNA_pol_B_exo1. {ECO:0000259|Pfam:
FT                                PF03104}.
FT   DOMAIN     2579   3028       DNA_pol_B. {ECO:0000259|Pfam:PF00136}.
FT   DOMAIN     3070   3137       zf-C4pol. {ECO:0000259|Pfam:PF14260}.
FT   REGION      428    498       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION      512    536       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION      621    641       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION      931    961       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1029   1063       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1152   1227       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1308   1340       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1544   1606       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1692   1725       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1740   1762       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1850   1877       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     1964   1993       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   REGION     2066   2173       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COILED     3093   3116       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS    468    490       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS    931    949       Polar. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1038   1063       Basic. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1165   1181       Basic. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1185   1201       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1213   1227       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1544   1566       Polar. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1700   1716       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1744   1762       Polar. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   1850   1876       Polar. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   2095   2124       Polar. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
FT   COMPBIAS   2148   2173       Polar. {ECO:0000256|MobiDB-lite:
FT                                A0A1V4JLX9}.
SQ   SEQUENCE   3158 AA;  355804 MW;  609CC80CC7E782C6 CRC64;
     MGSPLPGLDP CQSHFREAPT RRVPVVRVFG ATPAGQKTCL HLHGIFPYLY VPYDGFGQHP
     EHYLRQVAFS IDRALNVALG NPSSTIQHVF KVSLVSGMPF YGYHEKERQF MKIYLYNPAM
     VKRVCELLQG GAIMNKSYQP HEAHIPYLLQ LFIDYNLYGM NLINLAAVKF RKARRKSDTS
     GVSKRHRIHL PENSNNTSFI EWEEDEIPSS LMLKGVEPQS TCELEVDAVA ADILNQLDIE
     AQIGRNPGLQ AIWEDEKQRR RQKCESSQIK TPESQDRGFV PATESEKFFQ KRLKEILKQN
     DFSVTLSGSV DYSNGSEEFS AELTLHSGVL SPEAFQCTPA NMVEVHKDKK MNKESNRMHT
     DKEEEALINE EAILNIVENS QSFQPLSQRL NQTTVFMDSS ADEAMIELLA GLENDGYQMG
     QHKTFSHHRS LGSCRNSQNS DDEENEPQCE KEEMELSLLM SQRWDSSIEE PGTKRRSASK
     NMHRSSTEED SSSEEEMEWS GNMLLTNLSI PQLDGTADEN GDNPLNNESS RTHSSVIATS
     KMSVKTSIFH KDAATLEPPS SAKITFQCKH TSALSSHVLN NEDLVEDLSQ PNTETRPELS
     VHALTKESTY AAKYPTAFSN SAHAENSHKE SNKKDTLPVP SSENNIFEYE DDISSVSRQI
     PSRKYTSIRK AEKDVSFMHV GRHIGDSMLN KNLFNFSDLS HSSHSKGKMM SEVNEKSSNA
     NINSFFPATV TENCELVSCS GGSRTVVHSL ENNTDEGGLN KLKIRYEEFQ EHKAEKPSLS
     QQAAHYMFFP SVVLSNCLSR PQKLAPVTYK LQQGNKQSRL KLSKKKHSFI NHQEPASIND
     VASVKESCYT QGNACSNIPD KDSALPSDLV QVPLEAFESK MPTSTANYTD CQFADVSLET
     EQSFGLCGNK YTLRTKRKVN YETEDSESSF VAHNSKINLP QPTEGVESLD GSQKSRKRRK
     LSKKLPPVII KYIIINRFRG RKNMLVKLGK VDSSEERVIL TEEKMNLYKK LAPLKDFWPK
     VPDSPATKYP IYPLTPKKSQ KRKAKHKSTK KKAGKPQKTG SKNIKRTLSF RKRTHTILSP
     PSPSYNAEAE DCDYNYSDVM SKLGFLSERS TSPVNTSPPR CWSPTDPKAE EILTNLDREA
     LFSRGPSMYN SKMVNSSVGK NSRAKTQVKK CKKKFASPTV STKKKKKINQ ADKTADDGKK
     KPRTKQRKKT AEKASSRKPV VFKDEKGNTR SAAEVKFVLK HQDLPEISYN SVNSQPLHNR
     KDSPLPGYSA GYLPSAQLPT AAEAQGSSAG RFHSLMELDK PVDAQCLPAP QEDPHSSLAS
     TPVASGREVP KISSQRPRTQ SAIFRMKESA LIQNVFDPSS HSTQVMQNAH ISKDKISAKA
     EEIKNLQNRY LPPAGKLNEA YDSLDTAKMD HLHATNYLHC KDNNQQRVFC LAEASKHSDP
     CSSILKSPEE SPGPLQLPKN CFVTSLKSPV KQLNWNQNQR GFILDMSRFK PETVEQKYQS
     ETTMQPKPIS QYKNRTIVAP SAFSEGQSGL AVLKELLQKR QQKAQNANVA QKPLPAKTQL
     SRSVPCPLEQ NKAIKRSRSV TSPRKSRAPR NTKPKEKTPK LSKMESFSQQ ITSRIDHSVS
     DDSPIFFSDP GFESCYSLED SLSPDHNYNF DINTIGQTGF CSFYSASQFV PADQNLPQKF
     LSDAVQDLGS GQTTENDFLC HNDQKSEEEK QHSSSTSKWR RSGSLSPELF DKTSLDNNEN
     HCHSQWRKNV QPSTSRSSSG TSCMQATEVC LNEKFKLSRN TVNKERFLNL SQPASSDWLQ
     NHISKETTFE PCQPLDSVNT SCTSILSSPD GELIDAASED LELYVSRNNE ALTPTPDSSP
     RSTSSPSQSK SGSFTPRTAH ILKPLMSPPS REEIMATLLD HDLAETIYQE PFCSNPSDAP
     EKPREIGGRV LTVETRLPND LLEFEGDFSL EGLRLWKTAF SAMTEGPRPG SPPRYGHSTV
     NKRESNSHKT SEDKKIVIMP CKCAPSQQQV QIWLHAKEEY EHFKKLPKNR PAELEKATES
     FSSTVLSEEK SIEVVKADKD LNLSNLEDER PIVPTKNSPA SVAETTKTQI KETRDKSIST
     IGTSINTEND TNSNKSPSES KTLITSTLEH DKEEEDEDYY VNYSSPDSPV LPPWQQVASP
     DPKQSNSEDT EWESQDIILS SVEGNDVAPV GSAQNSPSTQ EDVRTSFDMS PFPVNEDLGN
     SESICLHSTP IVQRKNHDGV PEVLGFTPLS TEAKAQKLSH KRGNNTDGLR RILLTTQMKN
     QFAALGVPKK ETSQIEGPSL NNTYGFKVSV ENLQEAKSLH EVQHLTLISM ELHARTRRDL
     EPDPEFDPIC ALFYCISSDT ALPNTDKKEI TGAIVIDSNR MLSSQGSRDQ APLLTRSGVT
     GLQVSYATDE RALFQEVVNI VKRYDPDILL GYEVQMHSWG YLLQRAAALH VDLCQMISRV
     PDEKKENRFA AELDEYGSDT MSEIHIVGRI ILNIWRMMRH EVNLMNYTFE NVGFHVLHQR
     FPLFTFRVLS DWFDNKADVY RWKMVDHYVS RVRGNLQLLD RLDLIDRTSE MARLFGIQFL
     HVLTRGSQYR VESMMLRIAK PMNYIAVTPS VQQRAQMKAL QCVPLIMEPE SRFYSNAVLV
     LDFQSLYPSI VIAYNYCYST CLGHVENLGK YDAFKFGCTS LRVPPDLLYQ IRHDITVSPS
     GVAFVKPSVR KGVLPRMLEE ILKTRIMVKQ SMKAYKHDKA ITRMLEARQL GLKYIANFTF
     GYTAANFSGR MPCSEVGDSI VHKARETLER AIKLVNDTKK WGAHVVYGDT DSMFVLLKGA
     TKEQSFKIGQ EIAEAVTATN PKPVKLKFEK VYLPCVLQTK KRYVGYMYET LDQKDPVFDA
     KGIETVRRDS CPAVSKILEC SIKLLFETRD ISQIKQYVQN QCMKLLEGKA SMQDFIFAKE
     YRGSSAYRPG SCVPALEITR RMFAYDRRSE PRVGERVPYV IVYGMPGLPL IQLVRRPMEV
     LQDPNLRLNA TYYITKQILP PLARVFSLIG IDVFSWYHEL PRIQKAASAA RSELEGRKGT
     ISQYFTTLHC PVCDELTQHG ICNKCRSQPQ HVAVILNQEI RELERKQEQL VKICKNCTGC
     FDQQIPCVSL NCPVLFKLSR VSRELSKAPY LRQLLDQF
//
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