ID A0A1V4JMM5_PATFA Unreviewed; 544 AA.
AC A0A1V4JMM5;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Transcription elongation factor B polypeptide 3 {ECO:0000313|EMBL:OPJ73456.1};
GN ORFNames=AV530_005803 {ECO:0000313|EMBL:OPJ73456.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ73456.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ73456.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ73456.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ73456.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ73456.1}.
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DR EMBL; LSYS01006902; OPJ73456.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4JMM5; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0070449; C:elongin complex; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR CDD; cd00183; TFIIS_I; 1.
DR Gene3D; 6.10.250.3180; -; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR010684; RNA_pol_II_trans_fac_SIII_A.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR15141:SF49; TFIIS N-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR15141; TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3; 1.
DR Pfam; PF06881; Elongin_A; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Elongation factor {ECO:0000313|EMBL:OPJ73456.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}; Protein biosynthesis {ECO:0000313|EMBL:OPJ73456.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648}.
FT DOMAIN 6..80
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 76..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 265..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 486..544
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 86..110
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 114..130
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 131..162
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 174..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 293..312
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 492..519
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 544 AA; 61032 MW; 679D59CA0D4825A5 CRC64;
MAEGRSVARR VLELKERLSC AQDTAQIIET LKVLQDLDIS LDILVETGIG KTVNSFRKHA
TAGNVAKNLV KQWKKLISPE NKSGQRGRKQ NTEKDRTKSS VSKEIKPSDE SKAPVLASRS
SSSAPISKKL NKHHTCSEKT KQSRDSESQK EGDNKEHSRS GSKHAAQGTN PQAKESDFKD
RTSIGSKKVS EKQHSSVTKK DSQPLKERPS KDASRQGNPE HGKKPKQEIV IKSKAKLSSD
EELEPPTMSF EYYLNYDQVT KNRKRKACSA GERPKRSSGQ MKCSLPQKTS KFSLAKEGEE
DLRSEGDQSE TPNKKTKVAS LQDLLNTPLP KFLTGISISS PPYAADFKAV VEPVVEAPQQ
SVFQRCLHYM NSASVCFKII LITFIEESDD LWKKHCQRDF KNESLLEYES WREMYLRLFN
QREEKLKILT KNIISAQSEK PKGRQVKMAY MTSAAKPPRN IRRQQEIHGT AGPLSQLHPI
EKCRRSRIPE SGDRNNTSSN PVCASNSSSS SSSTVTQDGK KPIKKIAPIM KKTLKTLKSR
VGRR
//
