ID A0A1V4KSE2_PATFA Unreviewed; 2678 AA.
AC A0A1V4KSE2;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 24-JAN-2024, entry version 12.
DE SubName: Full=Trinucleotide repeat-containing 18 protein isoform C {ECO:0000313|EMBL:OPJ87350.1};
GN Name=TNRC18 {ECO:0000313|EMBL:OPJ87350.1};
GN ORFNames=AV530_000841 {ECO:0000313|EMBL:OPJ87350.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ87350.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ87350.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ87350.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ87350.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ87350.1}.
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DR EMBL; LSYS01001700; OPJ87350.1; -; Genomic_DNA.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR CDD; cd04714; BAH_BAHCC1; 1.
DR CDD; cd20469; Tudor_TNRC18; 1.
DR Gene3D; 2.30.30.140; -; 1.
DR Gene3D; 2.30.30.490; -; 1.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR048924; BAHCC1-like_Tudor.
DR PANTHER; PTHR12505; PHD FINGER TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR12505:SF21; TRINUCLEOTIDE REPEAT-CONTAINING GENE 18 PROTEIN; 1.
DR Pfam; PF01426; BAH; 1.
DR Pfam; PF21744; BAHCC1-like_Tudor; 1.
DR SMART; SM00439; BAH; 1.
DR PROSITE; PS51038; BAH; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000190648}.
FT DOMAIN 2527..2672
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT REGION 94..181
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 354..376
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 384..403
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 479..507
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 525..568
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 773..833
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 845..899
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1315..1583
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1616..1697
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1730..1838
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2023..2148
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2165..2196
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2233..2481
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 101..120
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 121..181
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 354..374
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 547..568
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 773..787
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 860..880
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 882..897
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1315..1339
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1382..1442
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1512..1528
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1535..1551
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1552..1571
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1616..1648
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1663..1679
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1763..1784
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1785..1816
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2035..2049
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2059..2083
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2182..2196
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2335..2395
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2402..2455
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2456..2481
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2678 AA; 291304 MW; 52B486D4FDDC8E77 CRC64;
MESHRLGATG RLAPAAGPMA AGLPAALQPG KFLASGISLH SHPGFSHLPN GLYPSYIPLS
HLEPPSAGSP LLAQLGQHSL FESQKDGFYL AGHAGQSALH PQPPLSRTAG NHTSSTLLRE
KDLGQLHKSS KESLKDPGGK ERACRSDLSL PFTKKEAKPK EEPRPRSVVD LTQDTKPDSE
RKVSVVEKAV KVLGAEQDRC AKDPARHDEN MRPSAHAHAE RLKRGEPLLP SVGTLHPVHS
SMYTIFPPAK ELGREHKVIA PTFVPSVEAY DERSGPIQIA SQARDNKAKD KDLGKDFSCH
SDAKRMEALR EKGSVIRANS MALKRQVTSE PFLNRPGLGS PESREFLASK DLLKPSPEAE
HRSCERDRFQ RSSSKEAVKV YGTLDSSRQH LDHGQLKPPE QKWKPFEMGN FATTQMAVLA
AQHNHVTRAE EEAKKVYLDP SGLPRSSVNC GKKSPFGGLG NMKLDSSQLG ASKVQQLLSQ
QPAKQLKRDP ERPESAKSFG RESIGSQGEV EVRHLPVGIA VAVARQKDNS SSSKLGPSLA
DRDRSLSLSS IKGHGRSEDD CGDERSRHRD SHLLAGRLER DQEKLLRESK ELADFARIHP
SGCATNGLNS NLMVTGGPAL AGSGRWSADP ASHLAAHPWL PRTGSPSMWL AGHPYGLGHP
SLHQGMTPGF PPAMGGALPS AYQFARDPQS GQLVVIPSEH LPHFAELMDR APPLWPAMYP
PTRSSLQHAH QLQLLSHQQL LRQHELYILQ QQAAHAMELQ RSAQLVERLK ANEQRADMEE
KVTKRSLDSA KSGLSSSAPG LVHRKPPVLS PSASTSYSKA VSPPPLSPRA SPVSVLKAEV
IQKMEEPPSQ PAYSYPATPS SHPSSPPPAS PPPAPAIPPK EEAPETVEKK DLELEKEAAG
PYQALFPEIP PGYPFQSLPP SFGRHYPYLL QPTAASDADG LAPDVPLPAE GSEHMELSPE
VKPIHLSPSK MLEPIQAAAE EESLEERVKS EVQMEESQEG ICEQDMGTLN IAASAAVPVQ
NVDNCNLLLH QGEALGAMEQ DQEDLQSCPA PYQVVPCPAE AEAQAETGSG AETCSVHMDY
DGSLVNAENE PPEMDLTPQR EEASVAVDLQ SADVPRGREF PNLPPEEGEQ GPEIPSYAEE
AISCQIPALD IKPGDPLAGM NALVAATEMP QACSLLATAS VTPSQMKVEV LPDQALEHSF
LQGITLLSEI AEMELEKRKQ EMQSPESFPV RPTLESLLAA STHMLMEVLS TPFMESLKTI
RLPRELNPNK KYSWMQKKDE PMYSIKSAIE NMDAMELDYR MRLAELQRRY KEKQRELVKL
QRRRDSEEKH DEKSRSLARR GPGRPRKRKL GSSALSPIKE RGKSDSKSGK LSKSLLLSED
SETGEGMKKR HKGALPEEDE DVESGSGKMK GRNQSWEEHD AAPSFSNELK LKKKKVPSDQ
EQLASKLDKA LSLTRQDKLK SPFKFTDSSG GKPKTGGGGS RYLPPHEALP SKEEKKSLAK
NLGLSLKTTK EGKNKVTAKM KKMEVGLKVK NQLKVSHSPP ISEISSYSYN SSSEEEEEED
EEEEEEAEDY GMDGTDRLSS PALDESGLGL LARFAASAMP SPIVPPPLSI IQLEAKQKAK
KKEERQSLMG TEFEYTDSES EIKIRKKSPS GLLRGKKGPL EASSIPPSQT PSSLDSGSGS
ADKAKLGSEK GRKLKKFKSP KDLSFEFGLE ASDDDLWNRR RSERIFLHDA TMSSAMLSPA
APASSTPVSK PGRCGKGAPM SPKKEGSKGK ERKELSKQRK KGKETPCCSS SSSMSPPGIP
SSPSDVRVSL ANALGSTKKS KAKVKAKEVK KENRGKGGAV SKLMESMAAE EDFEPNQDSS
FSEDENIPLS MLVERPATPA PRSCIIDKDE LKDGLRVLIP MDDKLLYAGH VKTVHSPDIY
RVVVEGERGN RPHIYCLEQL LQEAIIDVKP PSVRFLPEGT RIAAYWSQQY RCLYPGTVVR
GALDLEEDAD LITVEFDDGD TGRIPLSHIR LLPPDYKIQC AEPSPALLVP STKRRSRKSS
KDTGEGKEGA ALGSEEPVSK GKGRGRKPSV KAKAEEAALP EEKDQVESSP VTSSVPEKPA
CLGKPSMKGS RKSQPLPAGG SPAPTEEKRS KASKMKISAK LHSPPQPAYQ PAVFSSILGT
EPYSDLPGTL AAFGSSDASA SKGKAKKGRP TEETQEFGTM VKAQRKHDNE ILIKLDHEGV
MSPKTKKMKE AMRMLEDSNL ASRRDNKSLL GLGYSPAVGA EGKQKSSRVK AAEGDPSPAS
FGGKFDGSAE TLTASKDQEE KAAAPAAVDE SESNSSDSSS ESEGEEEAEK NRGEAQDSSS
TSSRASTPLS SSNSSSSSSS SSSSSSSSSS SSSSASSTSS SSSSSSSSSS TTDEDSSCSS
DDEVAEAQPS SSVQQTLPPK QTKQAGKSRA SSHPQSQKQP AQQPVQQPAP QQSGNKSRPK
KREGIHLPTT KELAKRQRLP SVENRPKIAA FLPARQLWKW FGKPTQRRGM KGKARKLFYK
AIVRGKEIIR IGDCAVFLSA GRPNLPYIGR IQSMWESWGN NMVVRVKWFY HPEETNPGKK
LNEGKRWDQK SGRSLSTALQ ASNQRKDFME RALYQSSHVD ENDVQTISHK CLVVGLDQYE
QMLKTKKYQD SEDLYYLAGT YEPTTGMIFN TDGVPVIC
//