ID A0A1V4KVT6_PATFA Unreviewed; 2733 AA.
AC A0A1V4KVT6;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Nucleosome-remodeling factor subunit BPTF isoform G {ECO:0000313|EMBL:OPJ88526.1};
GN Name=BPTF {ECO:0000313|EMBL:OPJ88526.1};
GN ORFNames=AV530_003062 {ECO:0000313|EMBL:OPJ88526.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ88526.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ88526.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ88526.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ88526.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ88526.1}.
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DR EMBL; LSYS01001520; OPJ88526.1; -; Genomic_DNA.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0016589; C:NURF complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd05509; Bromo_gcn5_like; 1.
DR CDD; cd15559; PHD1_BPTF; 1.
DR CDD; cd15560; PHD2_3_BPTF; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR038028; BPTF.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR018359; Bromodomain_CS.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45975; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR PANTHER; PTHR45975:SF2; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF00628; PHD; 2.
DR Pfam; PF15613; WSD; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS00633; BROMODOMAIN_1; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS01359; ZF_PHD_1; 2.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 100..160
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 250..297
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 2554..2605
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 2631..2701
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 1..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 430..627
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 918..940
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1098..1120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1136..1328
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1365..1389
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1452..1493
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1510..1551
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1839..1869
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1912..1939
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2102..2144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2221..2346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2481..2545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 824..851
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 2450..2477
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..47
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 51..65
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 430..483
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 486..530
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 541..584
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 585..607
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1099..1113
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1164..1180
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1181..1221
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1245..1260
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1261..1288
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1296..1314
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1373..1389
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1458..1472
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1473..1493
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1536..1551
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1925..1939
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2102..2128
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2221..2263
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2264..2279
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2280..2346
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2483..2502
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2503..2519
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2520..2545
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2733 AA; 303574 MW; A5690C2F2CCBFDC6 CRC64;
MVSEEEEEGD PEDNQDSEEE EEEEIMEEED DDDSDYPEEM EDEDDASYCT ESSFRSHSTY
SSTPGRRRQR VHRPRSPILE EKDIPPLEFP RSSEDLMVPS EHIMNVIAIY EVLRNFGTVL
RLSPFRFEDF CAALVSQEQC TLMAEMHIVL LKAVLREEDT SNTTFGPADL KDSVNSTLYF
IDGMTWPEVL RVYCESDKEY HHVLPFQETE DYPYGPVENK IKVLQFLVDQ FLTTNIAREE
LMSEGVIQYD DHCRVCHKLG DLLCCETCSA VYHLECVKPP LEEVPEDEWQ CEVCVAHKVP
GVTDCVAEIQ KNKPYIRHEP IGYDRHRRKY WFLNRRIIIE EDSESEKDKK IWYYSTKIQL
AELIECLDKD YWEADLCKTL EEMREEIHRH MDVTEDLTNK ARGSNKSFLS AANDEILDII
RARKGEIVED KTTADDEAEK AKSDIDNDQT DAERGKEESG EQDKTEETPT EQDGERAKTE
EATVVGDKSN CVTSSTDDNT TNPSAGETSC SEGKDAMGCQ SETLDSNNVA EKKVASELPQ
ELSEETGQMI PSNSSSASAA ALQPDVENSS GSELGSGQND SIKTSEDAEN AEGGSHTSED
IGEKSNGERS DSPGAGKGTP GSTRMLTRLR NPDSKLSQMK SQQVAAAAHE ANKLYKEGRE
VLVVNSQGEV SRVNAKKEVV MKGNINNYFK LGQEGKYRVY HNQYATNSFA LNKHQHREDH
DKRRHLSHKF CLTPAGEFKW NGSVHGSKVL TISTLRLTII QLENNIPASF LHPNWASHRS
NWIKAVQMCS KPREFALALA ILECAIKPVV MLPIWRESLG HTRLRRMTAI EREEKEKVKK
KERKQEEEET MQQATWVKYT FPVKHQVWKQ KGEEYRVTGY GGWSWISKTH VHRFIPKLPG
NTNANYRKLL PTKSEDEKCN LDKRKGPIKV KTEKDRTKES LDLQAKDKED VSETLGKVQV
KEEKSREEKV EVGTISKSVD RAKDKVEKEI DGENDKVIKE EPMDVDDVKI ESPVKDEDSD
CKLDIINVSE GFHLRTCYKR KVKSSKLDGL LERRIKQFTL EEKQRLERMK LEASAKMGGV
QSVSAQKNID ELQMRKVQGE SQFDLSSQDQ TYISDKTRSE DVEQDCLPIS SISCTRSSEL
EPSSPLTNRL PKREGRLRDE ASPQPSEGEN SVQNDGKENN PESVNAEKCQ DALRESESSF
VDGLKETTAE GRRKWDVSET SGKPLRQKLP ISRVSQCERE NLEPVVTESS CRKDARATLG
KTDSAENSEQ QSKDSENNCM IKSHIEPSSS QESEMEEETA PGKTESKSET KIAFHQKSGS
KGLEHLGEVD ADEDLLRSKL TEANGQKQGQ ELKVEKSTIN KYLDQTNLNS VTDKKNNKDE
ETKRDLEKGK SAVQMNGKDN DIKVLSNDGC LAKDTCETKA GGDIEPKVNN INRSIPEHEI
KPLTFKESSV KPFMNGDIMT EDTKDKNKSR PQSSLEFESG ESVQSPEEKQ LSPERCTFGA
ASTPTHAACK ENNLNSETES METEVIEDKK VAPSPVTSCE ESSLSSDFAD QNGVQTYKTE
NVNGESKIKT VITEVTTTTS TVSTESKTVF KVAETVASND EKTTVVSSTE NCAISTVTTT
TTVTKLTAPA TDSNVDIISV QEHSKTVVTT TVTDSLTTPE GTLVTSMTVS KEYSTKDKVK
LMKFAKPKKT RSGTALPSYR KFVTKSSKKS IFVLPNDDLK KLARKGGIRE VPYFNYNAKP
ALDIWPYPSP RPTFGITWRY RLQTVKSLAG VSLMLRLLWA CLKWDDMAAK APPGGGTTRT
ETTETEITTT EIIKRRDVGP YGIRSEYCIR KIICPIGVPE APKETPTPQR KGLRSSALRP
KRPETPKQTG PVVIESWVAE EELELWEIRA FAERVEKEKA QAVEQQAKKR LEQQKQIPAA
GVAPAVTTAS STATTGSTPQ KVVVGPLAGP VPTGTKVVLT TKVGSPATVT FQQNKNFHQT
FATWVKQGQS STGVVQVQQK VLGIIPSTTG ASQTFTSFQP RTATVTIRPN TTGTLGTTST
SQVVQGTPLR PGMTVIRTPL QQSTLGKTII RTPLVVQQGI LPASQTQQVV TQIIRGQPVS
TAVSSTSTAS TSAGQKTVTS SGTSPQQIQP QPAPQPPRPQ QGQVKLTMAQ LTQLTQGQGG
SQGLTVVIQG QGQTTGQLQL IPQGVTVIPG PGQQLMQAAM PNGTIQRFLF TPLPAAATTA
STTTTTVSTS TSAAGEQKQA LQAPSALPSA QPQAQQPAQP PVQSQSAQPL PPAQPALQPE
PQTQPEAQTP ASGDSPVTPE AQSSKSPVQS PAQTQAQGQS PAQVPSQAQP AVPPQGQSQV
QPQQPAQVVM KQNAVIEHLK QKKTLTPAER EENQRMIVCN QVMKYILDKI DKEEKQAAKK
RKREESVEQK RSKQNATKLS ALLFKHKEQL KAEILKKRAL LDKDIQIEVQ EELKRDLAKI
KKEKEKAQAA AAAAAAAAAA AAATAPPPPP PPAPPVPPPQ PHVASVTSSS STTVPMPVSS
QKRKREEEKD AAASKSKKKK MISTTSKETK KDTKLYCICK TPYDESKFYI GCDRCQNWYH
GRCVGILQSE ADLIDEYVCP QCQSTEDAMT VLSPLTDKDY EGLRRVLRSL QAHKMAWPFL
EPVDPNDAPD YYGVIKEPMD LATMEERILK RYYKKVTEFV ADMTKIFDNC RYYNPSDSPF
YQCAEVLESF FVQKLKGFKA SRSHNNKLQS TAS
//
