ID A0A1V4KX13_PATFA Unreviewed; 1129 AA.
AC A0A1V4KX13;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 22-FEB-2023, entry version 17.
DE SubName: Full=Cold shock domain-containing protein E1 {ECO:0000313|EMBL:OPJ89039.1};
GN Name=CSDE1 {ECO:0000313|EMBL:OPJ89039.1};
GN ORFNames=AV530_019139 {ECO:0000313|EMBL:OPJ89039.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ89039.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ89039.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ89039.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ89039.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SIKE family.
CC {ECO:0000256|ARBA:ARBA00005537}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ89039.1}.
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DR EMBL; LSYS01001493; OPJ89039.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4KX13; -.
DR STRING; 372326.A0A1V4KX13; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR008555; SIKE.
DR InterPro; IPR024642; SUZ-C.
DR PANTHER; PTHR12913:SF1; COLD SHOCK DOMAIN-CONTAINING PROTEIN E1; 1.
DR PANTHER; PTHR12913; UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN; 1.
DR Pfam; PF00313; CSD; 5.
DR Pfam; PF05769; SIKE; 1.
DR Pfam; PF12901; SUZ-C; 1.
DR SMART; SM00357; CSP; 5.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 5.
DR PROSITE; PS00352; CSD_1; 4.
DR PROSITE; PS51857; CSD_2; 7.
DR PROSITE; PS51938; SUZ_C; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648}.
FT DOMAIN 358..422
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 444..511
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 518..580
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 681..745
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 849..912
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 945..1003
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 1004..1068
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 1079..1120
FT /note="SUZ-C"
FT /evidence="ECO:0000259|PROSITE:PS51938"
FT REGION 93..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 211..238
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1129 AA; 125700 MW; 390AA95D34373BAC CRC64;
MILCQKICGE GQPESHRGTA PMALVPLACL CLAQKARMSS LKPGKTPAMT CTIEKILTDA
KTLLERLKEH DTAAESLIDQ SAVLHQRVAA MREAGAAGTE KGPGAAAERP DPSRLRPHLL
LSQENTQIRD LQQENRELWI SLEEHQDALE LIMSKYRKQM LQLLQGRKGE DAEPVLKVHQ
ANSLEIESQI DRICEMGEVM RKAIQVDDDQ FFKVQEKLAQ LELENKELRE LLSISKESFE
VGREDLPDCE ARHVAQSLAP LPAQCRPRVG RLPAAHAQHE AAVLGRAHAR LRPGALARGR
DLFLRAVPCC SWRRWSGGAE LLGMNAIFEY HCEMSFDPNL LHNNGHNGYP NGTSAALRET
GVIEKLLTSY GFIQCSERQA RLFFHCSQYN GNLQELKVGD DVEFEVSSDR RTGKPIAIKL
VKIKPEILPE ERINGQVVCA VPHNLESKSP AAPGQSPTGS VCYERNGEVF YLTYTPEDVE
GNVQLETGDK INFIIDTNKH TGAVSARNIM LLKKKQARCQ GVVCAMKEAF GFIERGDVVK
EIFFHYSEFK GDLEALQPGD DVEFTIKDRN GKEVATDVRL LPQGTVIFED ISIEHFEGTV
TKVIPKVPSK NQSDPLPGRI KVDFVIPKEL PFGDKDTKSK VTLLESDHVR FNISTDRRDK
LERATNIEVL PNTFQFTNET REMGVIAAMR DGFGFIKCVD RDARMFFHFS EIMDGNQLHI
SDEVEFTVVP DMLSAQRNHA IRIKKLPKGT VSFHTQSDHR FVGTIDKEAT PAKATSPNKG
KEKEAEDGII VYDDCGVKLT IPYQAKDVEG SANPQIGDKV EFSVCEVKRT GLQTAVSVRM
LGRNYSSKRL LGYVAALKDN FGFIETANHD KEIFFHYSEY CGDIDSLELG DTVEYSLSKG
KGNKVSAEKV NKTHAVNGIT EEADPTVYSG KVIRPLRSVD PTQTEYQGMI EVMEDGEMKG
EVYPFGIVGM ANKGDCLQKG ETVKFQLCVL GQNGQTMAVN ITPFRRATVE CVKDQFGFIN
YEVGDSKKLF FHVKEVQDGV ELQAGDEVEF SVILNQRTGK CSACNVWRVC EGAKAVAAPR
PDRLVNRLKS INLDDANAPR LTVLRQPRGP DNSKGFGAER KIRQAGVID
//