ID A0A1V4L146_PATFA Unreviewed; 586 AA.
AC A0A1V4L146;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 03-MAY-2023, entry version 16.
DE SubName: Full=RNA polymerase II elongation factor ELL2 {ECO:0000313|EMBL:OPJ90574.1};
GN Name=ELL2 {ECO:0000313|EMBL:OPJ90574.1};
GN ORFNames=AV530_012257 {ECO:0000313|EMBL:OPJ90574.1};
OS Patagioenas fasciata monilis.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Patagioenas.
OX NCBI_TaxID=372326 {ECO:0000313|EMBL:OPJ90574.1, ECO:0000313|Proteomes:UP000190648};
RN [1] {ECO:0000313|EMBL:OPJ90574.1, ECO:0000313|Proteomes:UP000190648}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BTP2013 {ECO:0000313|EMBL:OPJ90574.1};
RC TISSUE=Blood {ECO:0000313|EMBL:OPJ90574.1};
RA Soares A.E., Novak B.J., Rice E.S., O'Connell B., Chang D., Weber S.,
RA Shapiro B.;
RT "Band-tailed pigeon sequencing and assembly.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the ELL/occludin family.
CC {ECO:0000256|ARBA:ARBA00009171, ECO:0000256|PROSITE-ProRule:PRU01324}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPJ90574.1}.
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DR EMBL; LSYS01000232; OPJ90574.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4L146; -.
DR STRING; 372326.A0A1V4L146; -.
DR Proteomes; UP000190648; Unassembled WGS sequence.
DR GO; GO:0008023; C:transcription elongation factor complex; IEA:InterPro.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR Gene3D; 6.10.140.340; -; 1.
DR Gene3D; 1.10.10.2670; E3 ubiquitin-protein ligase; 1.
DR InterPro; IPR042065; E3_ELL-like.
DR InterPro; IPR031176; ELL/occludin.
DR InterPro; IPR019464; ELL_N.
DR InterPro; IPR010844; Occludin_ELL.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR23288; OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL; 1.
DR PANTHER; PTHR23288:SF8; RNA POLYMERASE II ELONGATION FACTOR ELL2; 1.
DR Pfam; PF10390; ELL; 2.
DR Pfam; PF07303; Occludin_ELL; 1.
DR SUPFAM; SSF144292; occludin/ELL-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51980; OCEL; 1.
PE 3: Inferred from homology;
KW Elongation factor {ECO:0000313|EMBL:OPJ90574.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:OPJ90574.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000190648};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 472..582
FT /note="OCEL"
FT /evidence="ECO:0000259|PROSITE:PS51980"
FT REGION 111..145
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..286
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 309..364
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 382..453
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 314..334
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..364
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 412..450
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 586 AA; 66209 MW; 1AA9F35FFC46E720 CRC64;
MAELREGERY GVSCEDGSSR VTVMHVKLTE TAVRALEKYQ SCKTHGKLEI MLTVKNLLSL
LIVFLLNLQF SFKDPKGILK FPELMRQMKH IRLTSTCQTL AKITLREALT ASSKRTQGKK
VQVKRPPPRS VPDAAPQRKR SAPVNPAVAV RRTHAHGAVS QRPYRDRIIH LLALKNYKKP
ELLARLQRDG VNQKDKNSLG IILQQVASLN PKDNSYTLKD YLFKDIQKDW PGYSEIDKQS
LELILSRKLN SSQNATSTSH SGSPVNSNKD APSTPQKRPS NSSFVGSLMN RKQRISHLTS
RSQFSGFLPH YSEKAGAPPP PRPAAAPTPS VLLPTSNPPQ ISSSPCTPEG RGTQDLPVDT
SGQKHCGVYE DQQQKYTSQT GLGVPAPVQE EHPESAGRKR VVLHQKPKKA KKRKDNDGSE
AQDSTSTSEE EKDLSKEETA KLEESSRLNS CEGAEETCVA SADSPLSTSE QPDYFLKYIA
IVSYEQRQSY KDDFNAEYDE YRNLHARMES ISRRFMELDA QRKLLTPGSK EYQMLHEEVL
EEYRKIKQSN PSYYEEKYRC MYLHNKLSHI KRLIGDFDQQ QAGSWH
//
