ID A0A1V4LXM5_9PSED Unreviewed; 615 AA.
AC A0A1V4LXM5;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:OPK12028.1};
GN ORFNames=BZ163_00690 {ECO:0000313|EMBL:OPK12028.1};
OS Pseudomonas sp. VI4.1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1941346 {ECO:0000313|EMBL:OPK12028.1, ECO:0000313|Proteomes:UP000189889};
RN [1] {ECO:0000313|EMBL:OPK12028.1, ECO:0000313|Proteomes:UP000189889}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VI4.1 {ECO:0000313|EMBL:OPK12028.1,
RC ECO:0000313|Proteomes:UP000189889};
RA Imperato V., Thijs S., Mcammond B., Douwen Y., Broeders P., Kowalkowski L.,
RA Gawronski S., Vangronsveld J.;
RT "Draft genome sequence of Pseudomonas yorbenii VI4.1, a hydrocarbonoclastic
RT isolate from crude oil contaminated soil in Bobrka, Poland.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OPK12028.1}.
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DR EMBL; MULM01000041; OPK12028.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V4LXM5; -.
DR Proteomes; UP000189889; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN GLRR; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 314..541
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 615 AA; 68601 MW; 984C922539A370EB CRC64;
MAAPALPLSH DAIIQDSWSR CRAFGLDHQS PPAFDQLPPE GIARLLESQH SLVQTTHQEV
LPYYENILSN SNCLIMLADN QGQVLTSWGT QRFIEPRLTR GFSAGASWME RCSGTNAIGT
ALACEQAVHI EHDEHFLKAN RFMTGSAAPI FDAERKVIAV LDVSSDSYLP PSHTLGMVKM
MSQTVENRLI LNLFHGQHFQ LTFNTGLNNL DSQWAGLLIF DESGQVLSAN RRADYLLGIS
LSRVSVESLF KVALLELLSQ PEGVPFALQA SGRNRFQCLL KRPKQVPVQA RLFSAPKGAE
PPVTAPAAIS LNTLHFGDSR VEKAVRQAER LLEKDIPLLI HGETGVGKEV FVKALHQASS
RSKQSFIAVN CAAIPAELVE SELFGYEKGA FTGANQKGSI GLIRKADKGT LFLDEIGDMP
LPTQARLLRV LQERCVQPVG SSELFPVDIR IISATNRSLR EQVQLGRFRE DLYYRIGGLT
LELPPLRERS DKEALFKRLW EQHREPSQWA GLSREVLELF GRHPWPGNLR QVSSVMQVAL
AMAEEQPVRP EHLPDDFFVD LEMEPVEMEE PLAVDLNDAE ELNRQLQALG GNISHLARRL
GVSRNTLYKR LRQTE
//
