ID A0A1V6M1C0_9BACT Unreviewed; 575 AA.
AC A0A1V6M1C0;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=BIY37_04490 {ECO:0000313|EMBL:OQD46198.1};
OS Candidatus Brocadia sapporoensis.
OC Bacteria; Planctomycetota; Candidatus Brocadiia; Candidatus Brocadiales;
OC Candidatus Brocadiaceae; Brocadia.
OX NCBI_TaxID=392547 {ECO:0000313|EMBL:OQD46198.1, ECO:0000313|Proteomes:UP000242219};
RN [1] {ECO:0000313|EMBL:OQD46198.1, ECO:0000313|Proteomes:UP000242219}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=40 {ECO:0000313|EMBL:OQD46198.1,
RC ECO:0000313|Proteomes:UP000242219};
RX PubMed=27932661;
RA Ali M., Haroon M.F., Narita Y., Zhang L., Rangel Shaw D., Okabe S.,
RA Saikaly P.E.;
RT "Draft Genome Sequence of the Anaerobic Ammonium-Oxidizing Bacterium
RT 'Candidatus Brocadia sp. 40'.";
RL Genome Announc. 4:e01377-16(2016).
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OQD46198.1}.
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DR EMBL; MJUW02000052; OQD46198.1; -; Genomic_DNA.
DR RefSeq; WP_070066629.1; NZ_MJUW02000052.1.
DR AlphaFoldDB; A0A1V6M1C0; -.
DR Proteomes; UP000242219; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 3.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000242219};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:OQD46198.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 47..110
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 128..193
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 214..282
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 299..369
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 386..456
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 474..543
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 549..575
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 556..575
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 575 AA; 64034 MW; E2E611BF80D19DFC CRC64;
MDRDFLKEYN VNLADIEREV EAIVGSADNK KKIESTYYDS IQNFEVGSVL KGRILSALGD
NIVIDCGYKS EGMIPKFEFD DPSEIKIGDD VEVLLEAVED DSGLIKLSKR KADRIRGWER
VIAKYKEGDI ITGRVTRKIK GGLLVDMGVP IFLPASQIDV KPPGDISQYI GQEVTCRILK
IDESRQNIVV SRRKLIEEDR DKKKQGLLSE IAVGQTRKGL VKNIADFGAF IDLGGLDGLL
HITDMSWGRI SHPSEMLAID DEVEVMILDI DKEKEKVALG LKQKSQNPWF LIDEKYPVGS
RVKGQVVNIM SYGAFVKLET GIEGLVHISE MSWTRRINHP SEMVAIGDMV EVVVLKIDKE
KEEISLSMKQ TEVNPWTVIE EKYPPGTKIK GRVRNLTNYG AFIEIEEGVD GLLHISDMSW
ARKVGHPSEI VKKGDKVEAV VLSVDREKKR VALGLKQLSD DPWVKEIPEK YKVGDVITGK
VTKLTNFGAF LELGKGIEGL LHISELSSEK VNNPADVVNI GDDLEVRVIR IEPEARKIGL
SLKKMFGAEG RSEIPATPNE DSQKPSGDEA SAMNT
//
