ID A0A1V8UH98_9PEZI Unreviewed; 682 AA.
AC A0A1V8UH98;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Pre-mRNA-splicing factor clf1 {ECO:0000313|EMBL:OQO22792.1};
GN ORFNames=B0A51_10313 {ECO:0000313|EMBL:OQO22792.1};
OS Rachicladosporium sp. CCFEE 5018.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetidae; Cladosporiales; Cladosporiaceae; Rachicladosporium.
OX NCBI_TaxID=1974281 {ECO:0000313|EMBL:OQO22792.1, ECO:0000313|Proteomes:UP000192386};
RN [1] {ECO:0000313|Proteomes:UP000192386}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCFEE 5018 {ECO:0000313|Proteomes:UP000192386};
RA Coleine C., Masonjones S., Stajich J.E.;
RT "Genomes of endolithic fungi from Antarctica.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in pre-mRNA splicing and cell cycle progression.
CC Required for the spliceosome assembly and initiation of the DNA
CC replication. {ECO:0000256|ARBA:ARBA00037040}.
CC -!- SUBUNIT: Associated with the spliceosome.
CC {ECO:0000256|ARBA:ARBA00011524}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the crooked-neck family.
CC {ECO:0000256|ARBA:ARBA00008644}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OQO22792.1}.
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DR EMBL; NAEU01000449; OQO22792.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1V8UH98; -.
DR STRING; 1974281.A0A1V8UH98; -.
DR Proteomes; UP000192386; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045075; Syf1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR11246:SF3; CROOKED NECK-LIKE PROTEIN 1; 1.
DR PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR Pfam; PF02184; HAT; 1.
DR Pfam; PF14559; TPR_19; 1.
DR SMART; SM00386; HAT; 14.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50005; TPR; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000192386};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 72..105
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 555..574
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 682 AA; 81320 MW; FEF0899E71354EF1 CRC64;
MESSRGPQRV ENKAAAPQQI SAEQLLREAV DRQEEGVKAP TQRFADLEEL HEFQGRKRRE
FEDYVRRNRI NMGNWLRYAM WELEQKEYRR ARSVFERALD CDPTNVQLWV RYVEAEMKER
NINHARNVLD RAVTIQPRID KLWYKYVYME EMLGQIPNVR QVFERWMSWE PDEAAWLAYI
KLEKRYGEFE RARNIFERFT IVHPEARNWI KWAKFEDENG TSDLVREVYG IAIETLGEDF
MDEKLFIAYA RFESKLKEFE RARAIYKYAL DRMPRSSSAL LHKQYTQFEK QYGDQSGVED
VVLSKRRVLY EEQVTENPSN YDAWFDYARL EETSADPARV RDVYERAIAQ IPPSREKHHW
RRYIYLWIFY AMYEELTTKD IHRTASIYQE CLNLIPHKSF TFAKIWILKA QFELRQSQLD
RARKTMGTAI GLCPKNKLFR AYVELELKLF EFSRCRTLYE KWIEWDPSNS TAWIKFAELE
RGLEDFERVR GIFELAVQQP TLDMPELVWK AWIDFEDEEG EVERCRALYE RLLQKTDHVK
VWISFAQFEL NVPDADAQEP EDEETEPPIS DAAKSRARAV FTRASKLYKD RDLTSERVAL
LNAWKGFEDV HGRPEDQEAL AKQMPRRIKK RRKLDDESFE EYMDYVFPAD DEGAAKLGKL
LAAAQKFKRE KEEAAAREAA AG
//
