ID A0A1W0W3U5_SORBI Unreviewed; 725 AA.
AC A0A1W0W3U5;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=SORBI_3002G136800 {ECO:0000313|EMBL:OQU89036.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:OQU89036.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:OQU89036.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR EMBL; CM000761; OQU89036.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1W0W3U5; -.
DR EnsemblPlants; OQU89036; OQU89036; SORBI_3002G136800.
DR Gramene; OQU89036; OQU89036; SORBI_3002G136800.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000000768; Chromosome 2.
DR ExpressionAtlas; A0A1W0W3U5; baseline and differential.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0004672; F:protein kinase activity; IEA:InterPro.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16655; RING-Ubox_WDSUB1-like; 1.
DR Gene3D; 1.10.510.10; Transferase(Phosphotransferase) domain 1; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR027267; AH/BAR_dom_sf.
DR InterPro; IPR011009; Kinase-like_dom_sf.
DR InterPro; IPR000719; Prot_kinase_dom.
DR InterPro; IPR008271; Ser/Thr_kinase_AS.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45647; OS02G0152300 PROTEIN; 1.
DR PANTHER; PTHR45647:SF46; OS09G0569800 PROTEIN; 1.
DR Pfam; PF00069; Pkinase; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00220; S_TKc; 1.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF103657; BAR/IMD domain-like; 1.
DR SUPFAM; SSF56112; Protein kinase-like (PK-like); 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
DR PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 371..638
FT /note="Protein kinase"
FT /evidence="ECO:0000259|PROSITE:PS50011"
FT DOMAIN 652..725
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REGION 93..141
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 170..200
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 219..338
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 94..114
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 170..193
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 725 AA; 81105 MW; C086BA74FA5ACB16 CRC64;
MKKPSTSNEE IAKVEAETLI IEKNNVANGI VELINQHRIT KLVMGMSSFS TKRKVPKSKV
AAIVHQQAKP YCQIFFICKG SLGCTRDANL GCTKADSPRS SSASTLSDET EIPTRSVSLP
PGHPGYRGSP DESFLPRRSH SVSYPSSGLI TNVERMSPIA PQSIHVKTTY CSPNSSLPSN
EGSSSSSLKD SDSLDGSPVP ASIISYEEQQ MSMVENGMHN EVFERLQQAR TELERSRKEA
CEGRQKAERD LFEASMKSKA RENSLHKEKK EVEEKLTKEK SILEKEKLQI YNELQKANEQ
RAQLENKLLQ TNSLLEELQQ LQGELQREKE DALREVEEMC KLYCNRNFAS AGEVSLTEFS
YSEIEEATNN FDGSREIGQG GCASVYRGFL RHTTVAIKKF NREGAVGEKE FNDEVEILCR
MRHPNLATLI GLCRDPKVLV YEFMPNGSLE DRLQCKLHTE PLPWRMRVRI AADICTALIF
LHSNKPKSIA HGDLKPDNVL LDANFVGKLG DFGISRSLDL TNTTVTPYHR TDHIKGTLGY
MDPGYIASGE LTAQYDVYSF GVVLLRLLTG KSPLGLQSEV EASMSSGVLH EILDASAGEW
PLEHAEELAR LALKCCRLNR KDRPDLAKEA WGILQAMMNE PPPSSAHPPK AEAPSYFICP
MTQEIMRDPH IAADGFTYEG DAIKDWIQRG HTMSPMTYLN LSHHELIPNN ALRFAIQEWQ
MGQQQ
//
