ID A0A1W1ZIE9_9SPHN Unreviewed; 950 AA.
AC A0A1W1ZIE9;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=2-oxoglutarate dehydrogenase E1 component {ECO:0000256|ARBA:ARBA00013321};
DE AltName: Full=Alpha-ketoglutarate dehydrogenase {ECO:0000256|ARBA:ARBA00030680};
GN ORFNames=SAMN06272759_103179 {ECO:0000313|EMBL:SMC48103.1};
OS Novosphingobium sp. B1.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1938756 {ECO:0000313|EMBL:SMC48103.1, ECO:0000313|Proteomes:UP000192500};
RN [1] {ECO:0000313|Proteomes:UP000192500}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B1 {ECO:0000313|Proteomes:UP000192500};
RA Varghese N., Submissions S.;
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: E1 component of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex which catalyzes the decarboxylation of 2-oxoglutarate, the
CC first step in the conversion of 2-oxoglutarate to succinyl-CoA and
CC CO(2). {ECO:0000256|ARBA:ARBA00003906}.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- SUBUNIT: Homodimer. Part of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex composed of E1 (2-oxoglutarate dehydrogenase), E2
CC (dihydrolipoamide succinyltransferase) and E3 (dihydrolipoamide
CC dehydrogenase); the complex contains multiple copies of the three
CC enzymatic components (E1, E2 and E3). {ECO:0000256|ARBA:ARBA00011301}.
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DR EMBL; FWXL01000003; SMC48103.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1W1ZIE9; -.
DR STRING; 1938756.SAMN06272759_103179; -.
DR OrthoDB; 9759785at2; -.
DR Proteomes; UP000192500; Unassembled WGS sequence.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR CDD; cd02016; TPP_E1_OGDC_like; 1.
DR Gene3D; 3.40.50.12470; -; 1.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 3.40.50.11610; Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain; 1.
DR Gene3D; 1.10.287.1150; TPP helical domain; 1.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR NCBIfam; TIGR00239; 2oxo_dh_E1; 1.
DR PANTHER; PTHR23152:SF4; 2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1; 1.
DR PANTHER; PTHR23152; 2-OXOGLUTARATE DEHYDROGENASE; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052}.
FT DOMAIN 594..785
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 950 AA; 104433 MW; DCFB07F7260C44FA CRC64;
MGSELHEFDV DPAQEGPQPG PSWANKRWPI TDAASGDDLT QAMDPMALKL AIKESAKKGG
APLDEAALQQ AATDSIRAMT LIRTYRVRGH LAADLDPLGL ARQKLPADIS PEYHGFTAAD
AKRKIYIGGV LGLEWATLDE LVAILRANYC GHIGFEYMHI ADVEERRFIQ DRIEGGDKSI
DFTPNGKKAI LAAVVRGEQY EKFLGRKYVG TKRFGLDGGE SMIPALEAVI KYGGQLGVKE
IVYGMAHRGR LNVLANVMAK PYRVIFHEFS GGSANPQDVG GSGDVKYHLG TSTDREFDGT
KVHMSLVPNP SHLETVDPIV LGKVRAQQVF RDDIGDDVGP DARHKQVLPV LIHGDAAFAG
QGIVWECFGL SGVRGYNTGG CIHFIINNQI GFTTSPQFSR GSPYPSDVAK GVQAPILHVN
GDDPEAVTFA CKMAIDYRQK FGRDIVIDMW CYRRFGHNEG DEPSFTQPLM YAKIRQHPGV
SDIYAKRLVG EGVIDANYKG EIESHFVATL ETEFEAAKGY KANEADWFGG RWSGLNKPAD
PVTARRNVAT GIDQKLFDSL GRTLTTVPAD LTVHKTLGRV IDAKREMFSS GQGFDWATGE
ALAFGSLVSE GYGVRLSGQD CGRGTFSQRH AVWVDQTDER KYVPLKTLPH GTFEVLDSTL
SEYGVLGFEY GYASADPKSL VLWEAQFGDF ANGAQIVIDQ YIAASEAKWL RANGLVMLLP
HGYEGQGPEH SSARLERYLQ LCAEDNIQVC NITTPANYFH VLRRQMHRPF RKPLIIMTPK
SLLRHPLAKS VASDFVGESH FMRILSDINP AADKDTRKVI LCSGKVAYDL IEARDAAGIT
DTQIIRLEQL YPFPGEPLAL RLSRMPNLEE VVWCQEEPRN NGSWFFVEPM IEESLKAANS
KVARPRYAGR AAAASPATGL ASRHASEQGA LVADALGLSV RGEIRRQKKN
//