ID A0A1W2BG76_9FIRM Unreviewed; 504 AA.
AC A0A1W2BG76;
DT 07-JUN-2017, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=PAS domain S-box-containing protein {ECO:0000313|EMBL:SMC71428.1};
GN ORFNames=SAMN02745168_2149 {ECO:0000313|EMBL:SMC71428.1};
OS Papillibacter cinnamivorans DSM 12816.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Papillibacter.
OX NCBI_TaxID=1122930 {ECO:0000313|EMBL:SMC71428.1, ECO:0000313|Proteomes:UP000192790};
RN [1] {ECO:0000313|EMBL:SMC71428.1, ECO:0000313|Proteomes:UP000192790}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12816 {ECO:0000313|EMBL:SMC71428.1,
RC ECO:0000313|Proteomes:UP000192790};
RA Afonso C.L., Miller P.J., Scott M.A., Spackman E., Goraichik I.,
RA Dimitrov K.M., Suarez D.L., Swayne D.E.;
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FWXW01000005; SMC71428.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1W2BG76; -.
DR STRING; 1122930.SAMN02745168_2149; -.
DR OrthoDB; 9803970at2; -.
DR Proteomes; UP000192790; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000192790};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 50..101
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 193..422
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT COILED 159..186
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 504 AA; 57340 MW; 815A9158FC44284D CRC64;
MICNECGHKN TGYDCLECSW LSAWEDGPEE SPEWLSRQEL EEELACSRSI ARRLNRIVEY
SSNPLFATDG EGSIIKVNAA YEKISGFDRG ELLGRNVKDL VGVLMSQSST LAAIQTKEKA
VLEQKLLRKG RIGVPTSVPV FAGNDLKMVV SSNWDIDEIE SLKSSLEREK RKSKKYLSEL
ERLREELLSP TDIIAKDKST MDVLHRARKV GGVDSSVLIT GETGTGKEEF AKYIHSVSGR
RQKPFVRVNC GAIAQSIIES EFFGYEKGAF TGANPGGKKG FFETADNGTI FLDEIGELPY
DMQAKLLRVL QEQEILRVGG SRPVKVNVRV ISATNRDLRQ MIQEKRFRED LFYRLSVVTL
EIPPLRDRPN DILPLAMYFM DQLNRRYKMK KTLSRDAYKL LKEYLWPGNV RELKNVLEEA
VIMSESDRIA GRDLEIPGRP DLERSSLDEG VTLEQVMDET EYRYMRQALD ECKSMRKAAL
RLGVPPTTYA RRLKTLERKM GIRQ
//
