GenomeNet

Database: UniProt
Entry: A0A1W6L5D2_9BURK
LinkDB: A0A1W6L5D2_9BURK
Original site: A0A1W6L5D2_9BURK 
ID   A0A1W6L5D2_9BURK        Unreviewed;      5804 AA.
AC   A0A1W6L5D2;
DT   05-JUL-2017, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2017, sequence version 1.
DT   27-MAR-2024, entry version 25.
DE   RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN   ORFNames=A4W93_05165 {ECO:0000313|EMBL:ARN19348.1};
OS   Piscinibacter gummiphilus.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Sphaerotilaceae; Piscinibacter.
OX   NCBI_TaxID=946333 {ECO:0000313|EMBL:ARN19348.1, ECO:0000313|Proteomes:UP000193427};
RN   [1] {ECO:0000313|EMBL:ARN19348.1, ECO:0000313|Proteomes:UP000193427}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NS21 {ECO:0000313|EMBL:ARN19348.1,
RC   ECO:0000313|Proteomes:UP000193427};
RA   Tabata M., Kasai D., Fukuda M.;
RT   "Complete genome sequence of natural rubber-degrading, novel Gram-negative
RT   bacterium, Rhizobacter gummiphilus strain NS21.";
RL   Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP015118; ARN19348.1; -; Genomic_DNA.
DR   STRING; 946333.A4W93_05165; -.
DR   KEGG; rgu:A4W93_05165; -.
DR   OrthoDB; 8553452at2; -.
DR   Proteomes; UP000193427; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd00118; LysM; 1.
DR   Gene3D; 3.10.350.10; LysM domain; 1.
DR   Gene3D; 2.180.10.10; RHS repeat-associated core; 11.
DR   InterPro; IPR018392; LysM_dom.
DR   InterPro; IPR036779; LysM_dom_sf.
DR   InterPro; IPR031325; RHS_repeat.
DR   InterPro; IPR006530; YD.
DR   NCBIfam; TIGR01643; YD_repeat_2x; 13.
DR   PANTHER; PTHR32305; -; 1.
DR   PANTHER; PTHR32305:SF15; PROTEIN RHSA-RELATED; 1.
DR   Pfam; PF01476; LysM; 1.
DR   Pfam; PF05593; RHS_repeat; 9.
DR   SMART; SM00257; LysM; 1.
DR   PROSITE; PS51782; LYSM; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000193427};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        5102..5121
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          5011..5058
FT                   /note="LysM"
FT                   /evidence="ECO:0000259|PROSITE:PS51782"
FT   REGION          5355..5425
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        5355..5372
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        5389..5405
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   5804 AA;  616422 MW;  7AC15EB079B40285 CRC64;
     MVAVVSGAGL GLSNTSKELA GAAGQLGQSA FGRAGESVSV NAATGNLIIQ NRDEFVVGVG
     DDFNLIRTYN SLGGWDGDNG DGWRVGYYRR VSGLTGTVNT AGSTIKRIDA DGFESTYTYS
     GGRYVGKDGS GAFDSLTFAS GKWTWKDGNS GTTETYEESP AGSGAYRLMS VRDVEGNQTM
     LGYDGTGLLM MMMELPAGSQ SMSSALSFSY DSTTKRLMAI AAMAQDASGE ASRMRTVYGY
     DSNGRLSSVT TILNPEDMDA FDGRSYRVDY GYDASGRVTS IKQTDGTVLT IAYDASGRVS
     RYADALGNGS TFTYDTAART TTIVDANNQS TVLKYDAAQR LTEVSGAAAG GNGYKQVLAY
     DADGNLTSVT NPANEQTVSA YDTNGNLVRT TDAAGNVVEF AYDAANHLVA QTSYTVADPD
     GAAGPALPGG ALKTQYLYES TSTNRLRFTI SPEGRVTEHR YNTKGQRTSS TTYTTATYTA
     KPSPVLADLT TWAGALTVTD RAEAQQREYT YDVLGQLSSS KTYATASVNG STVTYGTVSE
     QRYVYDAFGR LLQSIDATGG TTAYAYDGMD RVTFVQDARG RVTTYNYDDA GGRIVVRNPA
     DNSDEISVYD KAGQLVAKSS GTSLLPVSSR QFIQAGSADW SGYQVPGTGL TFSSSTGAVL
     STGNAAATEI RSITGSRVYR FDSGMVFSAK VSMPALAVGQ SFTVGAGNAT GARYHRALVR
     DGQLFVQFFE NGEAKELQLS TAGKPLQAGV TYQVDVETGD FGSVLYVHTG DRSTGFVHRA
     SATDWGTARA EITAQDAPGL AVQQLQIQSL SELRHGGDGS VLLDQDFRLS PLGFSGWPEE
     EGLFSAGLNG VEVHSQVAGL SNAEHTVTGD AIHPVTSGFG VVSRFEITTG VAAAGRNLRV
     GVASTGTGTA ARALSARFID GDLYAEYRDA ATGNWVRVKL SSAGKMVADG QAYVVEVRAL
     ATGGAQLSVY RQGTSAADPS AFSYQIAQPV WPDQRGFITA FGDAASPSTI TTINRVQEVQ
     VVGAPAAALR SNFAYDKLGR LRAVVDGNGQ RSHVLYDAAG RKVADIDAVG RFTEYVYDAA
     GRLVQSVTYA TLVGSTQLAS LTDTAGNPVD VALSSVRPAP KAADDRIVTR YYDKAGRLQG
     TQDGLGYLTE NVYDGAGRVL STIAYSKTSA VVRIDTSTSN LTATPPAMTR PTSDAVNDRT
     SRLFYSADGL LQGTLDADGY LVTYEYDAAG RKISETRYAE ATEAAKRTGD LSAMLPTKRP
     GDRRSFLFYD NAGLISGGID ADGYLTTYGY DAAGRVTTTT RYLSTARLLV TAGANNTGIH
     LARAGLTLAS VMPTLTTNVV TTRTYNAAGE LVREATPDGA VSRFEYDSNG RLVASYRGLE
     ASPRVTRAEY DGAGQLTAEI DGLGNRTVHA YDTAGRRIST TDARGSKTFF YYDASGLLRY
     SILQTALGGE VTARTYNELG QLLKQPIAYA NRLSVADTAA LTGGLVNPTL TAKVQALADA
     TRDANITYAY NRRGELVTET DTSGNRTFHE YTAFGQRSLT LVELGSSKTN QTDWRYDRRG
     NVVRETVDPT LLNLYTLREY DAFGREVMRQ DQTGNRTTTR YLLNDGVTDS GRKVVVTDAA
     LVGRTVVYDA LDRTIRSIDG LGNATTYVHD TAGRKMTMTT AEGVRTVTES TAAGEVWKFT
     DGNGNVLEYF YDANGRVVQV KDALDGIAQN TYDVAGNLVK TVTGLKFNGA IAPVDDGSAI
     TTSYTFDAAN RVLTKVVDSG TGGLKLTSTY EYDGRGRQVR EVDPNGTVTT KTFSPRGYLS
     QVTVDDVAGG LQLKTTYSYD TAGRVLTVAE GNASTVTRTT KYVYDAAGRR TQEIVDPTGL
     DLRTTYMYDA AGRVVLKRDT LGHGTRYVYD TLGRLEYEVD STGAVTQHLY DVEGHETGKR
     TYAKRLAENH AARVWFEQGT NSDIHTLLGT FDAGDVVTAT VRFKGDTNVY GRMFLGDADG
     ADPYDNDIVT STYGTRDADG WQTLTLTWTM SHADRMWLYV YGGGGQPGDA LLYDSFKVTS
     VKKGQVLVDD MEGSSPVVAS NGGGTTWGYH GAQSQQVQSD IVLNPTLLTD AQIRAAVGTL
     ATAADHVTQA AYDKDGRVRF TVDAKGGLTE VRYTKTNQVA EKIRYATPFT GTPSATMTPA
     TSSMDQSTYT VYDVLGRPRF VVDAKNYVTE SRYDRQGHVV ATMAYATPLS ARPTPINGST
     LNEVLSKLPS EDRVTYYAYD AAGRLAFQQD GEGYVTEYQY DASGRVTRTL RYDTPSTLEG
     TPPSLAQFVA ATRKVTTFGS GLEGYAGAAG VLENGQLKLV STPTAGGTWA GSNGSRSLPP
     GSSFKYDVTP VQLQQALHLT VESVTGVYSR LALILNGDGS IVAQTYFGTD GRAEVIGTYV
     PGKTYVVEFT TTAKDAVAYF YEQGKSRDSG LIYRSLPALG WTSLRPTFAT SIHPTLAGTT
     YAYVDNIEER AASVTTASYD AAGRLVRSVS ADGVVTARGY DAVGRETDVT YAAGRPEATT
     THRVFDGGGR MVEETSAYNT AVASTTRYRY DGNGRLIAKT DPVGVADSLT KTTEADRVAA
     LARYTTRYGY DAVGNLVTTI DPLGAITMVD YDVFGNAVRK TDPRGFVTSM HYDKRNQLEQ
     LVDAERYLTV NAYDAFGNLT RTDKYAQRVE RPLDGRVTVL AAGSAAPASG AYLIAVAAQT
     QSTVYEYNLR NQQWKVTDAE GNAESKSHNA FGEAKSSTNR LGGTATFVYD RLGRLVSETL
     PKVMIDGAEV AVVNQHAYDA NGNRIRTIEA LGRPEQRTTT YQYDAMGRVT RETGETIQIY
     LHGVGTSSVA PTKSTVYDAL GRAVLMVDAN GARVMNWYDA LGRRTAELLE AAAGAGGQLK
     TFTYDAAGRV LSVSAYETLV AIPASPGGAA PAPVNPAKVR TTWFTFDGAG RQLTEEVRNI
     LVGAYRSDPD QYDIFNANLT VTKTYDAAGN AVRETDRRGS HAYTYYDGLG RKVLQVDREN
     YVTRWSYTDN TVTERRYATP VAGAGIGSDP AALVSGLDNG ADRIKVLVLD RLGRTVEERV
     LNVVYGQIDN AATGTYAERT GEAITRRTFD ALGNVKTQVD ADGRVSEFDY DKLGRQIYVG
     SGAFTGASGS TVQQRKLIEY NGLGLVTKET LLDANEATTS GDRVTLFFYN KQGQRVRVTD
     PGASVDYAFD ATGNLTYTMR QVRDADNVVS WQGEVMQWDY LGHEVSRQDA WAPINAQGVT
     GAFSYGERKE VRYNAYGEVT GKRTGGGGAT VAWQEWAEFD AAGRMVRGVS GDGVAKFYLY
     DQNGNATLTF ESTGVADFSQ ANFTLDQARA SGAALNISVY DRRDQIVRHI QPNFTIQNVL
     ARIDRQTTDV VGGTLYVGST ASPQKSTTLA VAPQGGTVAL GHVHATSVPA GTSLAVSLNV
     TVKAEITNSY GGTYLTHVGV LKTTVSSLTV PLPNLGWYGT GDYQVEYSDS SGVSLTVRVS
     SGSTQATLNL PTPGAGNYTI KISKWLNGSV IVPIVSGSGT LAPPASWSGS TVPATRTGPQ
     YLNLSPPALE QFHLAGQPDG AQTMKFEIQA PGSSTWVERP AGRVGVSEGW FLVSSAGWAD
     GVYKYRYTAY DGAGTAVNTA NGELTVAGGH ARAIAQAALV GGSTEVSGVG GDGTGIISFT
     PGVTPVGTSG GATVTGTLLG RREVYVDRSE SIGTQGPRAY GHYRFKVSTV QVNLPAWNGP
     APARYRVEFT GTNDLGQPIS MRTGYQTPPQ SGPTPPLDVV VNSGVLGTYT IRVFAEWGGG
     ERLLAQGTGS VPAGGDWYSG GNYYNPGTIF DQGAASQALG NVVTTAIPAQ WLISAPVAGE
     NRVDTVSVAY RPSGSSAPYT VVTAANRSVY NSDAITLDPA YLGMAANTQY EVVILTSGLT
     PDNTSRRIRS RQIGSFYSGQ PPSASLASAN LANGGFTVMR AAGSSRVLDF FDLGRVGSGG
     TTVTSATLRY RVKGSTGAWS APAGLPPRSE LANGAFSWDW TGLAGGKYDF VVEGFNASGG
     AVTRVAGSVD LGAAPQVTGY QTFGTSASDV TISGQPASAR SVVLRWTYKG MSGTNSAPGG
     TSGSALLETQ VKSDGSLVYV WHAKDQVPDL LGNFLYEYTV EAYTGTDGTG QLVNKATGQV
     WLGVDAREAV TGQVERSPTK VTFVPPAGVP ANAVLRLRYR TKASDDASAT AVDDQLGSAT
     RPYKDVAPPP QLINGQWIWD ATAINTGTPQ LYEYVAEYVD PQGNASGRST GTFRIGDSAP
     AGVVQLRATY SLGNSEGIFI SRSQAYNAFG EVRYEVDGRG NRRDVSYNTL GLLTEKLDAE
     VAVTAQNGYV STARAATRQL YSLGGLLVRQ TDANGNTTSF GYAANGNGAE DGNALLLWEH
     HADNGRKVMA YDEFGLMRTQ ENELHQVTRF DYDEVGRLQT LTRPAREAGT PGVTAAPPKQ
     TYRYDSFNRR IAVVNEVNVT SKTFYDAAGR VRKTVDGDNI ATTVDYTYVA AITGVGGYQV
     GGWRRVTTIA AGTVDAKTMT EDNDYFGHNV ARADFGNHTF TYVYDLAGHL KLQTGSSGQN
     ISYDYYANGY IKEIRDNALG VVTSFTYDKD GNRTSEFYRS IVTALRPVED VYEQSIAEYD
     AMNRVKSVHS TAMSFTADIN YEYDAVSNVR RIRSEYRDGQ NGGTRVQDLW YAYDKMNRFT
     VTQGTLSLNG GVTDRSQLSS ASDTRGAVVM GANGIFIGYN AAGQRTMATY GDKSATAQTG
     DSFTGYSNDG HTETYTYTTD GYLENVYLSD GRRSTRKNDA AGRVVEVANF KTVNGAEVWL
     DTKSTVYANN NSVNTVTFEK AGTEYYRSIT TNTNAKDGTL TQSVETTLNG SQAGPTTITN
     YKYVWWDGAR QTSIKNQASA QGVENWAPGF SEFEYDVNGH TKSVTDNTGS QPGMPRKLTY
     VNDAQGQVLR RDELVSGELH RWRQYYYLDG KRIGDVSNDG PSREDYAQAM NAQQDRRTTE
     ERYRDWKPIY SADFDQNYEP ITPDNPGPVS SSYSAQKGDT LQAIAAAVWG DSQMWYLIAD
     ANGLTGNEVL VEGQVLVIPN KVTNIHHNAS TRRVYNAGEA LGNTSPTLPA APPPPAADKG
     CGVIGTIIII IVAVVVTYFT AGAASGLFGT AAGAGGGAAG GAAAGTAAGA AGAGTAAGAG
     AAAGAGAAAA GAGTAVTVGS VASAAAAGAI GAAAGSIASQ LVGMAIGMQD KFSWNAVGQA
     ALGGAISGGI GNINAGGGAL RAAANGAMSA GLNLAIRGDW SWRQVAGAAV GAAASAQLAR
     TVGYQLFDGS DFGKTTGQYV GQFAGAVASS RVIQGKVDYR SAFAQTLGYA LGDGVASVLG
     AEAAGRRFGS ALRNSIVSQS QPKPTVGSGV ALNSGTAEGR GPQYSFNEAP LPTDYSLTSD
     DPVRVSSGGV DSRPVDSRDS QGRKEQLARM MRLANEPDAL GSVGTPFRVE ISGVGSTDPD
     DYNAQVVWFA NKRGEDLAPT VANAARLRLA PLDEGLSGVE LAQRFGRGFV GALEAVTIEP
     VRQVRDLGMG LASVTYNEWL RSDGDAHWLP EMKSGMAQAY ANGASHARLL MQSNPLTGVG
     VLSYDLTTAL MNGDWGAVAE MGGGVLGGFA IGKATSTYGG YGVRWAPGDI GAMPTLVQSQ
     RGATSLLNFE FVRPTPRFTS EGLQIPFGFK SEQEFLDFSS ALHNGLPAGV EVVFQGSSVT
     GVKGASSGGI KAGTPFDKGR RSDFDIGLIS EDLATQASLL EGMRIKTLPT RLGPLDATSS
     TQLGLGNLAE RLSLQAKRPV NFVLYDSREG AFSQPSLFIP KPPR
//
DBGET integrated database retrieval system