ID A0A1W6L5D2_9BURK Unreviewed; 5804 AA.
AC A0A1W6L5D2;
DT 05-JUL-2017, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN ORFNames=A4W93_05165 {ECO:0000313|EMBL:ARN19348.1};
OS Piscinibacter gummiphilus.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Sphaerotilaceae; Piscinibacter.
OX NCBI_TaxID=946333 {ECO:0000313|EMBL:ARN19348.1, ECO:0000313|Proteomes:UP000193427};
RN [1] {ECO:0000313|EMBL:ARN19348.1, ECO:0000313|Proteomes:UP000193427}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NS21 {ECO:0000313|EMBL:ARN19348.1,
RC ECO:0000313|Proteomes:UP000193427};
RA Tabata M., Kasai D., Fukuda M.;
RT "Complete genome sequence of natural rubber-degrading, novel Gram-negative
RT bacterium, Rhizobacter gummiphilus strain NS21.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP015118; ARN19348.1; -; Genomic_DNA.
DR STRING; 946333.A4W93_05165; -.
DR KEGG; rgu:A4W93_05165; -.
DR OrthoDB; 8553452at2; -.
DR Proteomes; UP000193427; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00118; LysM; 1.
DR Gene3D; 3.10.350.10; LysM domain; 1.
DR Gene3D; 2.180.10.10; RHS repeat-associated core; 11.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR031325; RHS_repeat.
DR InterPro; IPR006530; YD.
DR NCBIfam; TIGR01643; YD_repeat_2x; 13.
DR PANTHER; PTHR32305; -; 1.
DR PANTHER; PTHR32305:SF15; PROTEIN RHSA-RELATED; 1.
DR Pfam; PF01476; LysM; 1.
DR Pfam; PF05593; RHS_repeat; 9.
DR SMART; SM00257; LysM; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000193427};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 5102..5121
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 5011..5058
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT REGION 5355..5425
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 5355..5372
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 5389..5405
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 5804 AA; 616422 MW; 7AC15EB079B40285 CRC64;
MVAVVSGAGL GLSNTSKELA GAAGQLGQSA FGRAGESVSV NAATGNLIIQ NRDEFVVGVG
DDFNLIRTYN SLGGWDGDNG DGWRVGYYRR VSGLTGTVNT AGSTIKRIDA DGFESTYTYS
GGRYVGKDGS GAFDSLTFAS GKWTWKDGNS GTTETYEESP AGSGAYRLMS VRDVEGNQTM
LGYDGTGLLM MMMELPAGSQ SMSSALSFSY DSTTKRLMAI AAMAQDASGE ASRMRTVYGY
DSNGRLSSVT TILNPEDMDA FDGRSYRVDY GYDASGRVTS IKQTDGTVLT IAYDASGRVS
RYADALGNGS TFTYDTAART TTIVDANNQS TVLKYDAAQR LTEVSGAAAG GNGYKQVLAY
DADGNLTSVT NPANEQTVSA YDTNGNLVRT TDAAGNVVEF AYDAANHLVA QTSYTVADPD
GAAGPALPGG ALKTQYLYES TSTNRLRFTI SPEGRVTEHR YNTKGQRTSS TTYTTATYTA
KPSPVLADLT TWAGALTVTD RAEAQQREYT YDVLGQLSSS KTYATASVNG STVTYGTVSE
QRYVYDAFGR LLQSIDATGG TTAYAYDGMD RVTFVQDARG RVTTYNYDDA GGRIVVRNPA
DNSDEISVYD KAGQLVAKSS GTSLLPVSSR QFIQAGSADW SGYQVPGTGL TFSSSTGAVL
STGNAAATEI RSITGSRVYR FDSGMVFSAK VSMPALAVGQ SFTVGAGNAT GARYHRALVR
DGQLFVQFFE NGEAKELQLS TAGKPLQAGV TYQVDVETGD FGSVLYVHTG DRSTGFVHRA
SATDWGTARA EITAQDAPGL AVQQLQIQSL SELRHGGDGS VLLDQDFRLS PLGFSGWPEE
EGLFSAGLNG VEVHSQVAGL SNAEHTVTGD AIHPVTSGFG VVSRFEITTG VAAAGRNLRV
GVASTGTGTA ARALSARFID GDLYAEYRDA ATGNWVRVKL SSAGKMVADG QAYVVEVRAL
ATGGAQLSVY RQGTSAADPS AFSYQIAQPV WPDQRGFITA FGDAASPSTI TTINRVQEVQ
VVGAPAAALR SNFAYDKLGR LRAVVDGNGQ RSHVLYDAAG RKVADIDAVG RFTEYVYDAA
GRLVQSVTYA TLVGSTQLAS LTDTAGNPVD VALSSVRPAP KAADDRIVTR YYDKAGRLQG
TQDGLGYLTE NVYDGAGRVL STIAYSKTSA VVRIDTSTSN LTATPPAMTR PTSDAVNDRT
SRLFYSADGL LQGTLDADGY LVTYEYDAAG RKISETRYAE ATEAAKRTGD LSAMLPTKRP
GDRRSFLFYD NAGLISGGID ADGYLTTYGY DAAGRVTTTT RYLSTARLLV TAGANNTGIH
LARAGLTLAS VMPTLTTNVV TTRTYNAAGE LVREATPDGA VSRFEYDSNG RLVASYRGLE
ASPRVTRAEY DGAGQLTAEI DGLGNRTVHA YDTAGRRIST TDARGSKTFF YYDASGLLRY
SILQTALGGE VTARTYNELG QLLKQPIAYA NRLSVADTAA LTGGLVNPTL TAKVQALADA
TRDANITYAY NRRGELVTET DTSGNRTFHE YTAFGQRSLT LVELGSSKTN QTDWRYDRRG
NVVRETVDPT LLNLYTLREY DAFGREVMRQ DQTGNRTTTR YLLNDGVTDS GRKVVVTDAA
LVGRTVVYDA LDRTIRSIDG LGNATTYVHD TAGRKMTMTT AEGVRTVTES TAAGEVWKFT
DGNGNVLEYF YDANGRVVQV KDALDGIAQN TYDVAGNLVK TVTGLKFNGA IAPVDDGSAI
TTSYTFDAAN RVLTKVVDSG TGGLKLTSTY EYDGRGRQVR EVDPNGTVTT KTFSPRGYLS
QVTVDDVAGG LQLKTTYSYD TAGRVLTVAE GNASTVTRTT KYVYDAAGRR TQEIVDPTGL
DLRTTYMYDA AGRVVLKRDT LGHGTRYVYD TLGRLEYEVD STGAVTQHLY DVEGHETGKR
TYAKRLAENH AARVWFEQGT NSDIHTLLGT FDAGDVVTAT VRFKGDTNVY GRMFLGDADG
ADPYDNDIVT STYGTRDADG WQTLTLTWTM SHADRMWLYV YGGGGQPGDA LLYDSFKVTS
VKKGQVLVDD MEGSSPVVAS NGGGTTWGYH GAQSQQVQSD IVLNPTLLTD AQIRAAVGTL
ATAADHVTQA AYDKDGRVRF TVDAKGGLTE VRYTKTNQVA EKIRYATPFT GTPSATMTPA
TSSMDQSTYT VYDVLGRPRF VVDAKNYVTE SRYDRQGHVV ATMAYATPLS ARPTPINGST
LNEVLSKLPS EDRVTYYAYD AAGRLAFQQD GEGYVTEYQY DASGRVTRTL RYDTPSTLEG
TPPSLAQFVA ATRKVTTFGS GLEGYAGAAG VLENGQLKLV STPTAGGTWA GSNGSRSLPP
GSSFKYDVTP VQLQQALHLT VESVTGVYSR LALILNGDGS IVAQTYFGTD GRAEVIGTYV
PGKTYVVEFT TTAKDAVAYF YEQGKSRDSG LIYRSLPALG WTSLRPTFAT SIHPTLAGTT
YAYVDNIEER AASVTTASYD AAGRLVRSVS ADGVVTARGY DAVGRETDVT YAAGRPEATT
THRVFDGGGR MVEETSAYNT AVASTTRYRY DGNGRLIAKT DPVGVADSLT KTTEADRVAA
LARYTTRYGY DAVGNLVTTI DPLGAITMVD YDVFGNAVRK TDPRGFVTSM HYDKRNQLEQ
LVDAERYLTV NAYDAFGNLT RTDKYAQRVE RPLDGRVTVL AAGSAAPASG AYLIAVAAQT
QSTVYEYNLR NQQWKVTDAE GNAESKSHNA FGEAKSSTNR LGGTATFVYD RLGRLVSETL
PKVMIDGAEV AVVNQHAYDA NGNRIRTIEA LGRPEQRTTT YQYDAMGRVT RETGETIQIY
LHGVGTSSVA PTKSTVYDAL GRAVLMVDAN GARVMNWYDA LGRRTAELLE AAAGAGGQLK
TFTYDAAGRV LSVSAYETLV AIPASPGGAA PAPVNPAKVR TTWFTFDGAG RQLTEEVRNI
LVGAYRSDPD QYDIFNANLT VTKTYDAAGN AVRETDRRGS HAYTYYDGLG RKVLQVDREN
YVTRWSYTDN TVTERRYATP VAGAGIGSDP AALVSGLDNG ADRIKVLVLD RLGRTVEERV
LNVVYGQIDN AATGTYAERT GEAITRRTFD ALGNVKTQVD ADGRVSEFDY DKLGRQIYVG
SGAFTGASGS TVQQRKLIEY NGLGLVTKET LLDANEATTS GDRVTLFFYN KQGQRVRVTD
PGASVDYAFD ATGNLTYTMR QVRDADNVVS WQGEVMQWDY LGHEVSRQDA WAPINAQGVT
GAFSYGERKE VRYNAYGEVT GKRTGGGGAT VAWQEWAEFD AAGRMVRGVS GDGVAKFYLY
DQNGNATLTF ESTGVADFSQ ANFTLDQARA SGAALNISVY DRRDQIVRHI QPNFTIQNVL
ARIDRQTTDV VGGTLYVGST ASPQKSTTLA VAPQGGTVAL GHVHATSVPA GTSLAVSLNV
TVKAEITNSY GGTYLTHVGV LKTTVSSLTV PLPNLGWYGT GDYQVEYSDS SGVSLTVRVS
SGSTQATLNL PTPGAGNYTI KISKWLNGSV IVPIVSGSGT LAPPASWSGS TVPATRTGPQ
YLNLSPPALE QFHLAGQPDG AQTMKFEIQA PGSSTWVERP AGRVGVSEGW FLVSSAGWAD
GVYKYRYTAY DGAGTAVNTA NGELTVAGGH ARAIAQAALV GGSTEVSGVG GDGTGIISFT
PGVTPVGTSG GATVTGTLLG RREVYVDRSE SIGTQGPRAY GHYRFKVSTV QVNLPAWNGP
APARYRVEFT GTNDLGQPIS MRTGYQTPPQ SGPTPPLDVV VNSGVLGTYT IRVFAEWGGG
ERLLAQGTGS VPAGGDWYSG GNYYNPGTIF DQGAASQALG NVVTTAIPAQ WLISAPVAGE
NRVDTVSVAY RPSGSSAPYT VVTAANRSVY NSDAITLDPA YLGMAANTQY EVVILTSGLT
PDNTSRRIRS RQIGSFYSGQ PPSASLASAN LANGGFTVMR AAGSSRVLDF FDLGRVGSGG
TTVTSATLRY RVKGSTGAWS APAGLPPRSE LANGAFSWDW TGLAGGKYDF VVEGFNASGG
AVTRVAGSVD LGAAPQVTGY QTFGTSASDV TISGQPASAR SVVLRWTYKG MSGTNSAPGG
TSGSALLETQ VKSDGSLVYV WHAKDQVPDL LGNFLYEYTV EAYTGTDGTG QLVNKATGQV
WLGVDAREAV TGQVERSPTK VTFVPPAGVP ANAVLRLRYR TKASDDASAT AVDDQLGSAT
RPYKDVAPPP QLINGQWIWD ATAINTGTPQ LYEYVAEYVD PQGNASGRST GTFRIGDSAP
AGVVQLRATY SLGNSEGIFI SRSQAYNAFG EVRYEVDGRG NRRDVSYNTL GLLTEKLDAE
VAVTAQNGYV STARAATRQL YSLGGLLVRQ TDANGNTTSF GYAANGNGAE DGNALLLWEH
HADNGRKVMA YDEFGLMRTQ ENELHQVTRF DYDEVGRLQT LTRPAREAGT PGVTAAPPKQ
TYRYDSFNRR IAVVNEVNVT SKTFYDAAGR VRKTVDGDNI ATTVDYTYVA AITGVGGYQV
GGWRRVTTIA AGTVDAKTMT EDNDYFGHNV ARADFGNHTF TYVYDLAGHL KLQTGSSGQN
ISYDYYANGY IKEIRDNALG VVTSFTYDKD GNRTSEFYRS IVTALRPVED VYEQSIAEYD
AMNRVKSVHS TAMSFTADIN YEYDAVSNVR RIRSEYRDGQ NGGTRVQDLW YAYDKMNRFT
VTQGTLSLNG GVTDRSQLSS ASDTRGAVVM GANGIFIGYN AAGQRTMATY GDKSATAQTG
DSFTGYSNDG HTETYTYTTD GYLENVYLSD GRRSTRKNDA AGRVVEVANF KTVNGAEVWL
DTKSTVYANN NSVNTVTFEK AGTEYYRSIT TNTNAKDGTL TQSVETTLNG SQAGPTTITN
YKYVWWDGAR QTSIKNQASA QGVENWAPGF SEFEYDVNGH TKSVTDNTGS QPGMPRKLTY
VNDAQGQVLR RDELVSGELH RWRQYYYLDG KRIGDVSNDG PSREDYAQAM NAQQDRRTTE
ERYRDWKPIY SADFDQNYEP ITPDNPGPVS SSYSAQKGDT LQAIAAAVWG DSQMWYLIAD
ANGLTGNEVL VEGQVLVIPN KVTNIHHNAS TRRVYNAGEA LGNTSPTLPA APPPPAADKG
CGVIGTIIII IVAVVVTYFT AGAASGLFGT AAGAGGGAAG GAAAGTAAGA AGAGTAAGAG
AAAGAGAAAA GAGTAVTVGS VASAAAAGAI GAAAGSIASQ LVGMAIGMQD KFSWNAVGQA
ALGGAISGGI GNINAGGGAL RAAANGAMSA GLNLAIRGDW SWRQVAGAAV GAAASAQLAR
TVGYQLFDGS DFGKTTGQYV GQFAGAVASS RVIQGKVDYR SAFAQTLGYA LGDGVASVLG
AEAAGRRFGS ALRNSIVSQS QPKPTVGSGV ALNSGTAEGR GPQYSFNEAP LPTDYSLTSD
DPVRVSSGGV DSRPVDSRDS QGRKEQLARM MRLANEPDAL GSVGTPFRVE ISGVGSTDPD
DYNAQVVWFA NKRGEDLAPT VANAARLRLA PLDEGLSGVE LAQRFGRGFV GALEAVTIEP
VRQVRDLGMG LASVTYNEWL RSDGDAHWLP EMKSGMAQAY ANGASHARLL MQSNPLTGVG
VLSYDLTTAL MNGDWGAVAE MGGGVLGGFA IGKATSTYGG YGVRWAPGDI GAMPTLVQSQ
RGATSLLNFE FVRPTPRFTS EGLQIPFGFK SEQEFLDFSS ALHNGLPAGV EVVFQGSSVT
GVKGASSGGI KAGTPFDKGR RSDFDIGLIS EDLATQASLL EGMRIKTLPT RLGPLDATSS
TQLGLGNLAE RLSLQAKRPV NFVLYDSREG AFSQPSLFIP KPPR
//