ID A0A1W6SLB5_9PROT Unreviewed; 930 AA.
AC A0A1W6SLB5;
DT 05-JUL-2017, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=EAL/GGDEF/PAS domain-containing protein {ECO:0000313|EMBL:ARO86601.1};
GN ORFNames=EBAPG3_001730 {ECO:0000313|EMBL:ARO86601.1};
OS Nitrosospira lacus.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Nitrosomonadaceae; Nitrosospira.
OX NCBI_TaxID=1288494 {ECO:0000313|EMBL:ARO86601.1, ECO:0000313|Proteomes:UP000012179};
RN [1] {ECO:0000313|EMBL:ARO86601.1, ECO:0000313|Proteomes:UP000012179}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=APG3 {ECO:0000313|EMBL:ARO86601.1,
RC ECO:0000313|Proteomes:UP000012179};
RX PubMed=25336720; DOI=10.1099/ijs.0.070789-0;
RA Urakawa H., Garcia J.C., Nielsen J.L., Le V.Q., Kozlowski J.A., Stein L.Y.,
RA Lim C.K., Pommerening-Roser A., Martens-Habbena W., Stahl D.A., Klotz M.G.;
RT "Nitrosospira lacus sp. nov., a psychrotolerant, ammonia-oxidizing
RT bacterium from sandy lake sediment.";
RL Int. J. Syst. Evol. Microbiol. 65:242-250(2015).
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DR EMBL; CP021106; ARO86601.1; -; Genomic_DNA.
DR RefSeq; WP_004175090.1; NZ_CP021106.3.
DR AlphaFoldDB; A0A1W6SLB5; -.
DR KEGG; nlc:EBAPG3_001730; -.
DR eggNOG; COG5001; Bacteria.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000012179; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 2.10.70.100; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08447; PAS_3; 2.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000012179};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 25..46
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 58..78
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 98..118
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 124..141
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 148..165
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 243..288
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 291..343
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 369..440
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 444..496
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 528..666
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 675..929
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 334..368
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 930 AA; 105661 MW; 9A55EA3DBDCB46F6 CRC64;
MIQHKPSSDS NTTQSDALKV EQTRLLYANL PTAIGTSLVL ALILVYVQRP VIDHALLFGW
LIVMIMVSLY RTILIVLWHG NRESGIYFIL RWRLRFRVWV IASGLVWGMS GILLFPAGNM
PHQVFLSFVL AGLSAGAVTT LSMDRLSVLS FLPLTLLPLI IRFWMESSEI SLSMGVMTAL
FLVVISQNAS RVGRTIHENL SLRIEASARE QRLRHSEESL NQAQQIALLG NFDWNPVSGE
MRWSDEHFRL WGLEPHAVIP SYALFSQAIH SDDVAPLEEI LQQALRGGRF YDFTYRIRWP
DNSEHQIHGR GEVVFDDAGR AVNVTGTVQD VTAHKQVEEA LQEGKMRLQQ LNQNLEQLVA
KRTSALRESE ARFRFLFEHM AVGVAQIDTM TGRFVRVNQK YANIIGYTAA EMLALDSQSL
THPDDLKTAV DNMERLKAEE IREFEMEERY FRKDGMVIWV KVTVSPMWVP GTKPDYHIAV
IQDITKHKQA EEQVHQLAFY DPLTRLPNRR LFLDRLQQAQ VHSTRHKTHC AVLFIDLDNF
KTLNDTRGHD IGDLLLIEVA KRLRDNVRSS DTVARLGGDE FVVIIEGLSE DSPGAAAQAK
EIGDKFLTSV AQPFKLQEFE YHGSSSIGIR LFHDGETSID DLLKHADTAM YQAKTAGRNT
LCFFDPSMQI ALEMRTAMVT ELRQALTRQQ FKLHYQRQVN AEGSVVGAEV LLRWQHPERG
MISPMVFIPI AEETGLIVPL GKWVLQMACA QLKQWEHDPG TRNFQLAVNI SARQFRQLDF
VDEVLEVLEK SGADPLKLKL ELTESLVLQD ITHSIEKMET LCSAGIRFSL DDFGTGHSSL
TYLKRLPLEQ IKIDQSFVSD ITTDPSDEVI VRTIIVMSNS LGMEVIAEGV ETEEQRDFLA
RNGCYTYQGY LFGRPMPIED FQKLISRFQV
//
