ID A0A1X7GD05_9SPHN Unreviewed; 859 AA.
AC A0A1X7GD05;
DT 05-JUL-2017, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Chaperone protein ClpB {ECO:0000256|ARBA:ARBA00017574, ECO:0000256|RuleBase:RU362034};
GN Name=clpB {ECO:0000256|RuleBase:RU362034};
GN ORFNames=SAMN06295910_1516 {ECO:0000313|EMBL:SMF67469.1};
OS Allosphingosinicella indica.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Allosphingosinicella.
OX NCBI_TaxID=941907 {ECO:0000313|EMBL:SMF67469.1, ECO:0000313|Proteomes:UP000192934};
RN [1] {ECO:0000313|Proteomes:UP000192934}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Dd16 {ECO:0000313|Proteomes:UP000192934};
RA Varghese N., Submissions S.;
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Part of a stress-induced multi-chaperone system, it is
CC involved in the recovery of the cell from heat-induced damage, in
CC cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the
CC processing of protein aggregates. Protein binding stimulates the ATPase
CC activity; ATP hydrolysis unfolds the denatured protein aggregates,
CC which probably helps expose new hydrophobic binding sites on the
CC surface of ClpB-bound aggregates, contributing to the solubilization
CC and refolding of denatured protein aggregates by DnaK.
CC {ECO:0000256|ARBA:ARBA00025613}.
CC -!- SUBUNIT: Homohexamer. The oligomerization is ATP-dependent.
CC {ECO:0000256|ARBA:ARBA00026057}.
CC -!- SUBUNIT: Homohexamer; The oligomerization is ATP-dependent.
CC {ECO:0000256|RuleBase:RU362034}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496,
CC ECO:0000256|RuleBase:RU362034}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR EMBL; LT840185; SMF67469.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1X7GD05; -.
DR STRING; 941907.SAMN06295910_1516; -.
DR OrthoDB; 9803641at2; -.
DR Proteomes; UP000192934; Chromosome i.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0042026; P:protein refolding; IEA:UniProtKB-UniRule.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR GO; GO:0009408; P:response to heat; IEA:UniProtKB-UniRule.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|RuleBase:RU362034};
KW Cytoplasm {ECO:0000256|RuleBase:RU362034};
KW Hydrolase {ECO:0000313|EMBL:SMF67469.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432}; Protease {ECO:0000313|EMBL:SMF67469.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000192934};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}; Stress response {ECO:0000256|RuleBase:RU362034}.
FT DOMAIN 3..149
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 415..495
FT /evidence="ECO:0000256|RuleBase:RU362034"
SQ SEQUENCE 859 AA; 93426 MW; F7D2A041C858337A CRC64;
MNLEKFTDRA RGFLQSAQTV ALRMNHQRIT PAHLLKALLE DDQGMAAGLI ARAGASADAA
VRAVDASLAR MPAVTGSGAS AAPGLDGETI RLLDQAEQIA SKAGDSYVTV ERMLLALALA
TTTDAGKALA EAGLKPEALN TAINELRGGR NADTASAEDR YDALKKFARD LTQAARDGKL
DPVIGRDEEI RRTVQILARR TKNNPVLIGD PGVGKTAIAE GLALRIANGD VPDSLKDRRL
MALDMGALIA GAKYRGEFEE RLKGVLDEVR QAEGEIVLFI DEMHTLIGAG KAEGAMDAGN
LLKPALARGE LHCIGATTLD EYRKYVEKDP ALQRRFQPVF VGEPTVEDTI SILRGLKEKY
EAHHNVRITD GALVSAATLS NRYISDRFLP DKAIDLMDEA ASRLRMEVES KPEEIESLDR
RIIQLKIERE ALKKETDQAS KDRLATLEAD LANLEQQSGE LTARWQAEKD KIAGEAKVRE
KLEAARLELE QAQRAGDLAK AGELSYGTIP GLEKQLDAAQ AAGAGAMLRE EVTAEDIASV
VSRWTGIPVD RMLEGEREKL LQMEAIIGKR VIGQEDAVKA VSAAVRRARA GLQDPNRPLG
SFLFLGPTGV GKTELTRALA GFLFDDDAAM VRVDMSEFME KHSVARLVGA PPGYVGYEEG
GVLTEAVRRR PYQVVLFDEV EKAHADVFNI LLQVLDDGRL TDGQGRTVDF TNTLIILTSN
LGSQYLAGLG DDQAVADVEP QVMEVVRGHF RPEFLNRLDE IILFHRLAAG HMAPIVDIQV
ARVQRLLKDR KITLDLTDGA RAWLGRVGYD PVYGARPLKR AVQKYLQDPL ADKILRGEVR
DGSTVKVDEG DGALVLKAA
//