ID A0A1Y0D1B7_9GAMM Unreviewed; 365 AA.
AC A0A1Y0D1B7;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=Murein L,D-transpeptidase {ECO:0008006|Google:ProtNLM};
GN ORFNames=CBP12_06950 {ECO:0000313|EMBL:ART81134.1};
OS Oceanisphaera avium.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Aeromonadales;
OC Aeromonadaceae; Oceanisphaera.
OX NCBI_TaxID=1903694 {ECO:0000313|EMBL:ART81134.1, ECO:0000313|Proteomes:UP000243793};
RN [1] {ECO:0000313|Proteomes:UP000243793}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AMac2203 {ECO:0000313|Proteomes:UP000243793};
RA Sung H.;
RL Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
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DR EMBL; CP021376; ART81134.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y0D1B7; -.
DR KEGG; ocm:CBP12_06950; -.
DR OrthoDB; 9778545at2; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000243793; Chromosome.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR002477; Peptidoglycan-bd-like.
DR InterPro; IPR036365; PGBD-like_sf.
DR InterPro; IPR036366; PGBDSf.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR PANTHER; PTHR41533:SF1; L,D-TRANSPEPTIDASE YCBB-RELATED; 1.
DR Pfam; PF01471; PG_binding_1; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR SUPFAM; SSF47090; PGBD-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000243793};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 75..108
FT /note="Peptidoglycan binding-like"
FT /evidence="ECO:0000259|Pfam:PF01471"
FT DOMAIN 135..301
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 365 AA; 41293 MW; FC1132F7716DA36F CRC64;
MPQGSLNAIP EQVQLEVELD ALSVPSTVEL TEEAWSEPHN ELSELDFDIE EPELELPSRS
QLSSPLPAPL MRDPQRYDED LAAGVKRFQA RHGLTVDGVI GAQTYAWLNT PPLQRAQLLM
RSMLRTLIGD DLPSSYMLVN IPEYHLRLYQ NQALVFESNV IVGQNKRKTP IMASKITSVV
FNPPWNVPRS IINKDILPKL ARDPYYLDRQ GFEVLDNSGT HIIPREEWQT RFEEGGGFPY
RLRQRPGRGN ALGAYKFHLP NNDAIYLHDT PGRGLFARDS RAFSSGCVRV EGAEQLADWL
LHDQLSSARL SALKANPETK WVKVKQALPL YMVYWPGWLG ENGQPQFRND IYGFDNGITS
PFKAG
//
