ID A0A1Y0KS88_9PSED Unreviewed; 943 AA.
AC A0A1Y0KS88;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=oxoglutarate dehydrogenase (succinyl-transferring) {ECO:0000256|ARBA:ARBA00012280};
DE EC=1.2.4.2 {ECO:0000256|ARBA:ARBA00012280};
GN ORFNames=B9K09_12005 {ECO:0000313|EMBL:ARU88644.1};
OS Pseudomonas sp. M30-35.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1981174 {ECO:0000313|EMBL:ARU88644.1, ECO:0000313|Proteomes:UP000196445};
RN [1] {ECO:0000313|EMBL:ARU88644.1, ECO:0000313|Proteomes:UP000196445}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M30-35 {ECO:0000313|EMBL:ARU88644.1,
RC ECO:0000313|Proteomes:UP000196445};
RA He A., Zhao Q., Li H., Zhang J.;
RT "Complete genome sequence of the plant growth-promoting rhizobacterium
RT Pseudomonas rhizovicinus strain M30-35.";
RL Submitted (APR-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: E1 component of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex which catalyzes the decarboxylation of 2-oxoglutarate, the
CC first step in the conversion of 2-oxoglutarate to succinyl-CoA and
CC CO(2). {ECO:0000256|ARBA:ARBA00003906}.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
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DR EMBL; CP020892; ARU88644.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y0KS88; -.
DR OrthoDB; 9759785at2; -.
DR Proteomes; UP000196445; Chromosome.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR CDD; cd02016; TPP_E1_OGDC_like; 1.
DR Gene3D; 3.40.50.12470; -; 1.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 3.40.50.11610; Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain; 1.
DR Gene3D; 1.10.287.1150; TPP helical domain; 1.
DR InterPro; IPR032106; 2-oxogl_dehyd_N.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR NCBIfam; TIGR00239; 2oxo_dh_E1; 1.
DR PANTHER; PTHR23152:SF4; 2-OXOADIPATE DEHYDROGENASE COMPLEX COMPONENT E1; 1.
DR PANTHER; PTHR23152; 2-OXOGLUTARATE DEHYDROGENASE; 1.
DR Pfam; PF16078; 2-oxogl_dehyd_N; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000196445};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052}.
FT DOMAIN 599..792
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
SQ SEQUENCE 943 AA; 106349 MW; 01834994BA5A369F CRC64;
MQESVMQRMW DSAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFQKLPA DGGATTDVSH
STIRDHFVLL AKNKARAQPV SAGSVSSEHE KKQVEVLRLI QAYRMRGHQA AQLDPLGLWQ
RPLPADLSIN HYSLTDADMD TTFRTGGLVI GKEEASLREI LEALQQTYCR TIGAEFTHIV
DSEQRSWFQQ RLESVRGRPQ YSAEVQGHVL ERLTAAEGLE KYLGTKYPGT KRFGLEGGES
LIPLLDEIIQ RSGSYGTKEI VIGMAHRGRL NVLVNTFGKN PRDLFDEFEG KKTEGLSSGD
VKYHQGFSSN VMTAGGEVHL ALAFNPSHLE IVSPVVEGSV RARQDRRSDN VGDKVLPISI
HGDAAFAGQG VVMETFQMSQ TRGFKTGGTI HIVINNQVGF TISRVDDARS TEYCTDVAKM
IQAPIFHVNG DDPEAVLFVT QMAVDYRMQY KRDVVIDLVC YRRRGHNEAD EPNGTQPLMY
QQIAKQRTTR ELYAEMLVNA SRQTAEDVQA KSDEYRAALD NGQHVVKSLV KEPNKELFVD
WRPYLGHAWT ARHDTRFDLK TLQELSAKLL ETPDGFVVQR QVSKIYEDRQ KMTAGALPIN
WGYAETMAYA TLLFEGHPIR ITGQDVGRGT FSHRHAVLHN QKDGTPYIPL QKLYDDQPEF
DLYDSFLSEE AVLAFEYGYS TTTPNGLVIW EAQFGDFANG AQVVFDQFIS SGETKWGRLC
GLTMLLPHGY EGQGPEHSSA RLERYLQLCA EHNMQVCVPT TPAQIYHLLR RQVIRPLRKP
LVVLTPKSLL RHKLATSTLE DLAEGSFQTV IPEIDPIDPK KVDRVVMCSG KVYYDLLEKR
RNEGLNNIAI VRLEQLYPFP EDDLTEALAV YKNLKHIVWC QEEPMNQGAW YCSQHHMRRV
VTAHKKTLVL EYAGREGSAS PACGYASLHA EQQEKLLQDA FTV
//