ID A0A1Y1CR03_9BACT Unreviewed; 643 AA.
AC A0A1Y1CR03;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=YWFCY domain-containing protein {ECO:0000259|Pfam:PF14293};
GN ORFNames=ALGA_4081 {ECO:0000313|EMBL:BAX82372.1};
OS Labilibaculum antarcticum.
OC Bacteria; Bacteroidota; Bacteroidia; Marinilabiliales; Marinifilaceae;
OC Labilibaculum.
OX NCBI_TaxID=1717717 {ECO:0000313|EMBL:BAX82372.1, ECO:0000313|Proteomes:UP000218267};
RN [1] {ECO:0000313|Proteomes:UP000218267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SPP2 {ECO:0000313|Proteomes:UP000218267};
RA Watanabe M., Kojima H., Fukui M.;
RT "Complete genome sequence of Marinifilaceae bacterium strain SPP2, isolated
RT from the Antarctic marine sediment.";
RL Mar. Genomics 0:0-0(2017).
RN [2] {ECO:0000313|EMBL:BAX82372.1, ECO:0000313|Proteomes:UP000218267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SPP2 {ECO:0000313|EMBL:BAX82372.1,
RC ECO:0000313|Proteomes:UP000218267};
RA Watanabe M., Kojima H., Fukui M.;
RT "Complete genome sequence of Marinifilaceae bacterium strain SPP2, isolated
RT from the Antarctic marine sediment.";
RL Mar. Genomics 39:1-2(2018).
RN [3] {ECO:0000313|Proteomes:UP000218267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SPP2 {ECO:0000313|Proteomes:UP000218267};
RA Watanabe M., Kojima H., Fukui M.;
RT "Labilibaculum antarcticum sp. nov., a novel facultative anaerobic,
RT psychrotorelant bacterium isolated from marine sediment of Antarctica.";
RL Antonie Van Leeuwenhoek 113:349-355(2020).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the VirD4/TraG family.
CC {ECO:0000256|ARBA:ARBA00008806}.
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DR EMBL; AP018042; BAX82372.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y1CR03; -.
DR KEGG; mbas:ALGA_4081; -.
DR OrthoDB; 102453at2; -.
DR Proteomes; UP000218267; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003688; TraG/VirD4.
DR InterPro; IPR025988; YWFCY_dom.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF02534; T4SS-DNA_transf; 1.
DR Pfam; PF14293; YWFCY; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..42
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 62..79
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 91..110
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 4..139
FT /note="YWFCY"
FT /evidence="ECO:0000259|Pfam:PF14293"
SQ SEQUENCE 643 AA; 73664 MW; 63D86F930270C484 CRC64;
MSDESRELVK LHEGFRFFSY SLLILSLYLS QMTFFKGAGI YQEELEALFT KLMSLEFLSS
PLYSKTVCLV FLIITCIGTK AKKDRELKIS TLIFQVLFGL LLYWGSLLLV KWQAGLYLLF
SFWGFVLLNI AFDNISKLIN VNLMKDRFNK ENESFPQNQE LKENEYSVNL ASLFQYQGEE
KQGWINVVNP FRGSMVIGTP GSGKSFSVVL PFIKQHLNKG FCMCVYDFKF PDLSEVAYNH
FLKAKKNRKL PAVSAFYIIN FDDIRKSYRC NPLAPELMES PIDAFESSRT VLYNLNREWI
RKQGEFFSES AVSFFAAVIW FLKRYQNGQY CTLPHAIELL QLDYDDLFEV LSQEKDVVNI
INPFLNAHHR GASEQLEGQL GSLKIAISKI SSREIYWICS GNDFSLDIND PQRPKVICLA
NNPLRIEMYG AVLSLYITRM LKVMNRKGQR KSSLIFDELP TIYFRGLDTL IATARSNLIS
TLLGMQTIDQ LIRDCGKEQA NAILTNIGNV FAGQSVGDTA RFIQSRMGKI LQERQSVTIN
RNTQSTSFST QMDYLVPEGK IATLPQGVMV GQIADNFGEE VGQKNFNSLI QVDARQVKTE
EKHYQSIPDI YQFDNVEAVL ENNRSRICED IQKILLESKR NTQ
//
