ID A0A1Y1I9X6_KLENI Unreviewed; 820 AA.
AC A0A1Y1I9X6;
DT 30-AUG-2017, integrated into UniProtKB/TrEMBL.
DT 30-AUG-2017, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE SubName: Full=Transcription elongation factor (TFIIS) family protein {ECO:0000313|EMBL:GAQ85496.1};
GN ORFNames=KFL_002380090 {ECO:0000313|EMBL:GAQ85496.1};
OS Klebsormidium nitens (Green alga) (Ulothrix nitens).
OC Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae;
OC Klebsormidiales; Klebsormidiaceae; Klebsormidium.
OX NCBI_TaxID=105231 {ECO:0000313|EMBL:GAQ85496.1, ECO:0000313|Proteomes:UP000054558};
RN [1] {ECO:0000313|EMBL:GAQ85496.1, ECO:0000313|Proteomes:UP000054558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-2285 {ECO:0000313|EMBL:GAQ85496.1,
RC ECO:0000313|Proteomes:UP000054558};
RX PubMed=24865297; DOI=10.1038/ncomms4978;
RA Hori K., Maruyama F., Fujisawa T., Togashi T., Yamamoto N., Seo M.,
RA Sato S., Yamada T., Mori H., Tajima N., Moriyama T., Ikeuchi M.,
RA Watanabe M., Wada H., Kobayashi K., Saito M., Masuda T.,
RA Sasaki-Sekimoto Y., Mashiguchi K., Awai K., Shimojima M., Masuda S.,
RA Iwai M., Nobusawa T., Narise T., Kondo S., Saito H., Sato R., Murakawa M.,
RA Ihara Y., Oshima-Yamada Y., Ohtaka K., Satoh M., Sonobe K., Ishii M.,
RA Ohtani R., Kanamori-Sato M., Honoki R., Miyazaki D., Mochizuki H.,
RA Umetsu J., Higashi K., Shibata D., Kamiya Y., Sato N., Nakamura Y.,
RA Tabata S., Ida S., Kurokawa K., Ohta H.;
RT "Klebsormidium flaccidum genome reveals primary factors for plant
RT terrestrial adaptation.";
RL Nat. Commun. 5:3978-3978(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR EMBL; DF237187; GAQ85496.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Y1I9X6; -.
DR OrthoDB; 4793at2759; -.
DR Proteomes; UP000054558; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR CDD; cd00183; TFIIS_I; 1.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR044805; MD26A/B-like.
DR InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR46554; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED; 1.
DR PANTHER; PTHR46554:SF2; TFIIS N-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08711; Med26; 1.
DR SMART; SM00509; TFS2N; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Elongation factor {ECO:0000313|EMBL:GAQ85496.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00649}; Protein biosynthesis {ECO:0000313|EMBL:GAQ85496.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000054558}.
FT DOMAIN 174..247
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 88..153
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 329..820
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..131
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 342..357
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 399..413
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 427..456
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 481..495
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 507..532
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 644..678
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 731..750
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 752..809
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 820 AA; 86756 MW; 4D0581CFAB8949E7 CRC64;
MARNKTPKFA WRSFFAASGH DIWAIIAKAI EVAAEDEVSE LRKRRDGIVE QMYRLSAVAV
VPEAGCTSVE EGAGVQALAQ REGFVDGVDT STAPSKRINP SALQSDAAET DTVVNGSQQP
VQTTASPRGE KAHQKVTSLG AARRGDVDVS SRTGYADEEE LQVAIEQDSL RMQEILLSRS
KLSAPNKSEE AILQAMASLE RMNITVEELK ATEIGKTISS LRKHPAKPVQ IKAKHLVKSW
KELVEDFQAV TNEISKKSST DSIAIEGGLE APPLDAATLA SRNTSAELSQ LLEDFTAEDL
AAGLEKLSST VTPGSAPVNS RLAFLSPVYD PRPPASRDSD FEAATNPASA ASEPSGVSTD
KETREKAAAE KWQQAAKLNG VPEGGGGLRG QSLGRGDFVS AEVEKKESAG ERSERSSGVV
ASGDTPKRAR SLKETDVFGE GEGPAKKARV GEGSGPDGHR TESLGTGAKA DVKSASERGA
PSAQPPGSSS KASGDLRLGQ DRARSKTPEA AVQSSGHGSN PARASSSKPP GVVQATGAPG
SQLGGRQPGK PGERPRSGTP ELPVKLGRPS LSPVRTPVRP VSHSADGQKP LPKPHSANNF
LQFNDTAKRA TAPPRRNPEM RDPPPKQQSG VEQPVVGSQA NHANGEKGRE RHFHAGGVSE
ARKPAVGKPK KTPGLESASD DDLFDELDPL PRARKQSVRT PDGAPARRAT SAADVGKSRT
PVGSNSGSEP ETGLEEEDGF LSDSDSEEMG DLLMEPANKL EETKRRLHEK YLQAENAKKS
RTTLELKAGD VPTRKKALGH SDRSKARGSI HSKLSKLARR
//
